Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= AAMG01001719.1 Length=232 Score E Sequences producing significant alignments: (Bits) Value seq3088455 156 5e-36 >seq3088455 Length=13436 Score = 156 bits (172), Expect = 5e-36 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 15 GCTGAAGACTGCAACGGGCAACCTGAGCAACCAAGGCGGAGAACTGCGCAGTGCCACTCA 74 |||| ||| | || |||| |||| ||||| ||||| | |||| | ||| || Sbjct 2343 GCTGCAGATCACTACCGGCACGTTGAGTAACCAGGGCGGGCGCGTAAGCAGCGGCACGCA 2402 Query 75 GTTGGGGATGACCGTTACTGCACTGGACAACAGCCGTAACGGGCATGTCGCAAGCCAAGC 134 ||| |||||||| | || || ||||| |||||||| |||||| || | ||||| || Sbjct 2403 GTTAGGGATGACGCTGACGGCGCTGGATAACAGCCGCGCGGGGCATATCTCCAGCCAGGC 2462 Query 135 CGATGCAAGCCTGGATATGCAAGGTGGTTACCTAAACAATAACAGTGGTTTGATCAACGC 194 ||||| |||||| | ||||||||||| |||| || ||| | |||| ||||||| ||| Sbjct 2463 CGATGTGAGCCTGAACCTGCAAGGTGGTCACCTCAATAATCAGGGTGGCTTGATCAGCGC 2522 Query 195 GCCGGGGCAATTGCTGCTCAAGCAACTGGGCAGCGT 230 ||| ||||| ||||||||||||||||| |||||||| Sbjct 2523 GCCTGGGCAGTTGCTGCTCAAGCAACTCGGCAGCGT 2558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 623955487959