Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01002003.1
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
seq2916841 138 1e-30
seq287630 129 6e-28
>seq2916841
Length=361
Score = 138 bits (152), Expect = 1e-30
Identities = 160/208 (77%), Gaps = 6/208 (3%)
Strand=Plus/Minus
Query 1 CAAACAGCACGCGCACGTAGCGGCCCGAGGTCTTCGGGGCCGGTCCACAGGCCACCGGCG 60
||||||||| |||||||||||| |||||||| |||| | ||||| || |||||
Sbjct 284 CAAACAGCATCTGCACGTAGCGGCT-GAGGTCTTTCGGGCTTGCCCACAAACCGCCGGCA 226
Query 61 GCGAGGTCACGCACCCGGGGGTCGGTGCCGGCCTTCGCCATCCTCGTAGCCGTGGGCGCG 120
|||||||| ||||| | | |||| | ||| |||| || |||||||| | |||||
Sbjct 225 GCGAGGTCGCGCACTTGCGCATCGGCACTGGCGA-CGCCGTCTTCGTAGCCCAGCGCGCG 167
Query 121 ATAGCTCATTTCGCGCACCGGTACCCAGGAAACTCGGACTGGTTCATTTCGCAAGGGTGT 180
|| ||||| | ||||||||||||| | |||||| ||||||||||| || ||| || |
Sbjct 166 GTAACTCATCT-GCGCACCGGTACCGACAAAACTC-GACTGGTTCATCTC-CAATGGCTT 110
Query 181 GAGCAGGCTGCTTTCGTAACTGGGCTTC 208
||||||||||| || | ||||| |||||
Sbjct 109 GAGCAGGCTGCCTT-GCAACTGCGCTTC 83
>seq287630
Length=1179
Score = 129 bits (142), Expect = 6e-28
Identities = 149/194 (77%), Gaps = 5/194 (3%)
Strand=Plus/Minus
Query 1 CAAACAGCACGCGCACGTAGCGGCCCGAGGTCTTCGGGGCCGGTCCACAGGCCACCGGCG 60
||||||||| |||||||| ||| |||||||| ||||| || ||||| ||| |||||
Sbjct 494 CAAACAGCATCTGCACGTAGTGGCT-GAGGTCTTTGGGGCTGGCCCACAAGCCGCCGGCA 436
Query 61 GCGAGGTCACGCACCCGGGGGTCGGTGCCGGCCTTCGCCATCCTCGTAGCCGTGGGCGCG 120
|| |||||||||||| | | ||||| | ||| |||| || ||||| ||| |||||||
Sbjct 435 GCCAGGTCACGCACCTGTGCATCGGTACTTGCC-ACGCCGTCTTCGTACCCGAGGGCGCG 377
Query 121 ATAGCTCATTTCGCGCACCGGTACCCAGGAAACTCGGACTGGTTCATTTCGCAAGGGTGT 180
| |||||| | ||| ||||| || | |||||| ||||||||||| || || || |
Sbjct 376 AAAGCTCAACT-GCGTGCCGGTGCCGACAAAACTC-GACTGGTTCATCTC-CAGTGGCTT 320
Query 181 GAGCAGGCTGCTTT 194
|||||||| ||||
Sbjct 319 GAGCAGGCGACTTT 306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552557596302
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |