Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01002094.1
Length=130
Score E
Sequences producing significant alignments: (Bits) Value
seq108525 165 5e-39
seq3056479 161 6e-38
seq338812 131 1e-28
>seq108525
Length=7026
Score = 165 bits (182), Expect = 5e-39
Identities = 114/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 2 ccccccGACCTTAGTGATCACGCCGTTCCCGTGCAGCCGTTGGCGCGTACCTACCCGCGT 61
|| |||||||| | |||||| ||||| |||||||| ||| ||||||| ||||||||||||
Sbjct 6607 CCTCCCGACCTCACTGATCATGCCGTCCCCGTGCAACCGCTGGCGCGGACCTACCCGCGT 6666
Query 62 GGGTTGTACGTAGAACCGCACAGCCACGATTGGGGCCAGTTGCTCTACGCCATGAGCGGT 121
|||||||| || || || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct 6667 GGGTTGTATGTGGAGCCACACAGCCACGACTGGGGCCAGTTGCTCTACGCAATGAGCGGG 6726
Query 122 GTGATGTGG 130
|||||||||
Sbjct 6727 GTGATGTGG 6735
>seq3056479
Length=1260
Score = 161 bits (178), Expect = 6e-38
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 2 ccccccGACCTTAGTGATCACGCCGTTCCCGTGCAGCCGTTGGCGCGTACCTACCCGCGT 61
|| |||||||| | |||||| || || |||||||| ||| ||||||| ||||| ||||||
Sbjct 420 CCTCCCGACCTCACTGATCATGCTGTGCCCGTGCAACCGCTGGCGCGCACCTATCCGCGT 361
Query 62 GGGTTGTACGTAGAACCGCACAGCCACGATTGGGGCCAGTTGCTCTACGCCATGAGCGGT 121
|||||||| || ||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct 360 GGGTTGTATGTGGAACCCCATAGCCACGACTGGGGCCAGTTGCTCTACGCCATGAGCGGG 301
Query 122 GTGATGTGG 130
|||||||||
Sbjct 300 GTGATGTGG 292
>seq338812
Length=834
Score = 131 bits (144), Expect = 1e-28
Identities = 81/87 (93%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 2 ccccccGACCTTAGTGATCACGCCGTTCCCGTGCAGCCGTTGGCGCGTACCTACCCGCGT 61
||||||||||| |||||||||||||| |||||||| || |||||||| ||||||||||||
Sbjct 87 CCCCCCGACCTCAGTGATCACGCCGTGCCCGTGCAACCCTTGGCGCGCACCTACCCGCGT 28
Query 62 GGGTTGTACGTAGAACCGCACAGCCAC 88
|||||||| ||||||||||||||||||
Sbjct 27 GGGTTGTATGTAGAACCGCACAGCCAC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 310734467000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |