Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq222150 152 9e-35
seq10722 149 1e-33
seq210950 136 7e-30
seq2081632 122 2e-25
seq2081631 122 2e-25
seq2052818 122 2e-25
seq1814696 122 2e-25
seq2415640 120 5e-25
seq1970050 114 2e-23
seq1970049 114 2e-23
seq2206868 105 1e-20
seq2252401 100 5e-19
seq2087455 98.7 2e-18
seq1787275 87.8 3e-15
seq769035 86.0 1e-14
seq1971986 75.2 2e-11
seq1772359 73.4 7e-11
>seq222150
Length=2306
Score = 152 bits (168), Expect = 9e-35
Identities = 192/259 (74%), Gaps = 11/259 (4%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59
|| || || ||||||||||||||| | | || |||||||||||| | || || ||||
Sbjct 2302 AGGGCGCACGGTGGATGCCTTGGCACTAAGAGCCGATGAAGGACGGGACTAACTC-CGAT 2244
Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119
| ||| |||||| | || | ||||||||| |||||||||||||||| ||||| |
Sbjct 2243 ATGCTTTGGGGAGCT-GTAAGTAAGCTTTGATCCAAAGATTTCCGAATGGGGGAACCCAG 2185
Query 120 CCCTTTGG-------GTCATTGCATGCTGAATACATAGGTATGCAAAGCGA-ACGCGGCG 171
| ||| || | ||| |||||||||||||| | | || | |||| | |
Sbjct 2184 CATTTTTTATAGAATGTTACTGCTAGCTGAATACATAGGCTAGTAGAGGTAGACGCAGAG 2125
Query 172 AACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGC 231
|||||||||||||||||| ||||||||| ||||| || ||||||| ||||| |||
Sbjct 2124 AACTGAAACATCTAAGTACCTGCAGGAAGAGAAAGAAAATTCGATTCCCTGAGTAGCGGC 2065
Query 232 GAGCGAAATGGGATGAGCC 250
|||||||| |||| |||||
Sbjct 2064 GAGCGAAACGGGAAGAGCC 2046
>seq10722
Length=3686
Score = 149 bits (164), Expect = 1e-33
Identities = 231/324 (71%), Gaps = 12/324 (4%)
Strand=Plus/Minus
Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65
||| |||||||||| |||| | | |||||||||||||||| || ||||||||||
Sbjct 3147 ACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATAAGCGT 3088
Query 66 CGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT 124
||| || ||| | || || | ||| ||||||||||||||||||||| |
Sbjct 3087 CGGTAAGGTGATATGA-ACCGTTATAGCCGGCGATTTCCGAATGGGGAAACCCAGTGTGA 3029
Query 125 TGGGTCATTGCATGCT-----GAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAA 179
| |||| || | |||||||||| | | |||||||| || |||||||||
Sbjct 3028 TTCGTCACACTATCGTTAAGTGAATACATAGCTTAACGAAGCGAACCGGGGGAACTGAAA 2969
Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239
|||||||||| | |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 2968 CATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAAC 2909
Query 240 TGGGATGAGCCTTTA---CGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAA-TAGGA 295
|||| |||| | || |||| || |||||||| | |||||||| | | |
Sbjct 2908 GGGGAGCAGCCCAGAACCTGAATCAGTTTGTGTGTTAGTGGAAGCGTCTGGAAAGTCGCA 2849
Query 296 GCCATAGCGGGTGATAGCCCCGTA 319
| || |||||||| ||||||
Sbjct 2848 G-GGTACAGGGTGATACTCCCGTA 2826
>seq210950
Length=3273
Score = 136 bits (150), Expect = 7e-30
Identities = 187/257 (73%), Gaps = 17/257 (7%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59
|| || || ||||||||||||| | | || |||||||||||| | || | ||||
Sbjct 2047 AGGGCGCACGGTGGATGCCTTGACACTAGGAGTCGATGAAGGACGGGACTAACGC-CGAT 2105
Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119
| ||| ||||||| | || | |||||||||| ||||||||||||||||||||||
Sbjct 2106 ATGCTTCGGGGAGCT-GTAAGTAAGCTTTGATCCGAAGATTTCCGAATGGGGAAACCCA- 2163
Query 120 CCCTTTGGGTCATTGCATG----------CTGAATACATAGG-TATGCAAAGCGAACGCG 168
|| | || || | ||| ||||||||||||| |||| || | || |
Sbjct 2164 --CTATACGTAATGGTATGGTATCCTTACCTGAATACATAGGGTATGGAAGACAGACCCA 2221
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
| ||||||||||||||||||| ||| ||||| ||||| ||| | |||| || |||||
Sbjct 2222 GGGAACTGAAACATCTAAGTACCTGGAGGAAGAGAAAGCAAATGCGATTTCCTGAGTAGC 2281
Query 229 GGCGAGCGAAATGGGAT 245
||||||||||| || ||
Sbjct 2282 GGCGAGCGAAACGGAAT 2298
>seq2081632
Length=127
Score = 122 bits (134), Expect = 2e-25
Identities = 94/112 (84%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||||||||||| | | |||||||||| ||||| ||||| ||||| ||||| ||||
Sbjct 1 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGG 60
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC 121
||| ||||||| ||||||||||| |||| || |||||||| ||||| |||
Sbjct 61 GAGACGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGCC 112
>seq2081631
Length=127
Score = 122 bits (134), Expect = 2e-25
Identities = 94/112 (84%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||||||||||| | | |||||||||| ||||| ||||| ||||| ||||| ||||
Sbjct 1 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGG 60
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC 121
||| ||||||| ||||||||||| |||| || |||||||| ||||| |||
Sbjct 61 GAGGCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGCC 112
>seq2052818
Length=127
Score = 122 bits (134), Expect = 2e-25
Identities = 94/112 (84%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||||||||||| | | |||||||||| ||||| ||||| ||||| ||||| ||||
Sbjct 3 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGG 62
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC 121
| || ||||||| ||||||||||| |||| || |||||||| ||||| |||
Sbjct 63 GGGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGCC 114
>seq1814696
Length=127
Score = 122 bits (134), Expect = 2e-25
Identities = 94/112 (84%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||||||||||| | | |||||||||| ||||| ||||| ||||| ||||| ||||
Sbjct 127 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGG 68
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC 121
||| ||||||| ||||||||||| |||| || |||||||| ||||| |||
Sbjct 67 GAGCCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGCC 16
>seq2415640
Length=153
Score = 120 bits (132), Expect = 5e-25
Identities = 119/152 (78%), Gaps = 9/152 (6%)
Strand=Plus/Minus
Query 76 GCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT------TGGGT 129
||||||| ||||||||||| |||| || |||||||| ||||| ||| | ||| |
Sbjct 151 GCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGCCATCATAAGATGGTT 92
Query 130 -CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGT 188
| || || |||||||||||||| | |||||| || ||||||||||||||||||
Sbjct 91 ACCTTACA--CTGAATACATAGGTGTAAGGGGCGAACCAGGGGAACTGAAACATCTAAGT 34
Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCC 220
| | ||||||||||||||||||||||||||
Sbjct 33 ACCCTGAGGAAAAGAAATCAACCGAGATTCCC 2
>seq1970050
Length=127
Score = 114 bits (126), Expect = 2e-23
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| | ||||||||||||||| | | |||||||||| ||||| | ||| ||||| |
Sbjct 16 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGGAGCCTGCGAAA 75
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGG 111
|||| |||||||| ||||||| ||||||||||| |||| || ||||||||
Sbjct 76 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGG 126
>seq1970049
Length=127
Score = 114 bits (126), Expect = 2e-23
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| | ||||||||||||||| | | |||||||||| ||||| | ||| ||||| |
Sbjct 16 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGAAGCCTGCGAAA 75
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGG 111
|||| |||||||| ||||||| ||||||||||| |||| || ||||||||
Sbjct 76 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGG 126
>seq2206868
Length=128
Score = 105 bits (116), Expect = 1e-20
Identities = 104/134 (78%), Gaps = 9/134 (7%)
Strand=Plus/Minus
Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235
|||||||||||||| | |||||||||||||||||||||||||| |||||||||||||
Sbjct 128 GAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGC 69
Query 236 GAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAATA 292
|||| |||| |||| ||| ||| | |||| ||| |||| |||||||||
Sbjct 68 GAAAGGGGACTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAAGT 15
Query 293 GGAGCCATAGCGGG 306
| ||||||| |||
Sbjct 14 GCGGCCATAGTGGG 1
>seq2252401
Length=132
Score = 100 bits (110), Expect = 5e-19
Identities = 105/138 (76%), Gaps = 9/138 (7%)
Strand=Plus/Minus
Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235
|||||||||||||| | |||||||||||||||||||||||||| |||||||||||||
Sbjct 132 GAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGC 73
Query 236 GAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAATA 292
||| ||| |||| ||| ||| | |||| ||| |||| |||||||||
Sbjct 72 GAACGGGGGCTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAAGT 19
Query 293 GGAGCCATAGCGGGTGAT 310
| ||||||| ||| |||
Sbjct 18 GCGGCCATAGTGGGGGAT 1
>seq2087455
Length=127
Score = 98.7 bits (108), Expect = 2e-18
Identities = 96/124 (77%), Gaps = 5/124 (4%)
Strand=Plus/Plus
Query 33 GCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATC 92
|||||||| ||||| ||||| ||||| ||||| |||||||| ||||||| |||||||||
Sbjct 1 GCGATGAAAGACGTGGTAGCCTGCGAAAAGCTTCGGGGAGTCGGCAAACAGACTTTGATC 60
Query 93 CGCAGATTTCCGAATGGGGAAACCCGGCCCTTTG-----GGTCATTGCATGCTGAATACA 147
|| ||| || |||||||| ||||| ||| | ||| || | ||||||||||
Sbjct 61 CGGCGATGTCTGAATGGGGGAACCCAGCCATCATAAGATGGTTATCTTACGCTGAATACA 120
Query 148 TAGG 151
||||
Sbjct 121 TAGG 124
>seq1787275
Length=127
Score = 87.8 bits (96), Expect = 3e-15
Identities = 98/129 (76%), Gaps = 9/129 (7%)
Strand=Plus/Plus
Query 96 AGATTTCCGAATGGGGAAACCCGGCCCTTTG-----GGTCATTGCATGCTGAATACATAG 150
|||| || |||||||| ||||| ||| | ||| || | |||||||||||||
Sbjct 1 AGATGTCTGAATGGGGGAACCCAGCCATCATAAGATGGTTATCTTACGCTGAATACATAG 60
Query 151 GTATGCA--AAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCA 208
| ||| | |||||| || ||||||||||||||||||| | ||||||||||||||
Sbjct 61 G--CGCAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGGAAAAGAAATCA 118
Query 209 ACCGAGATT 217
|||||||||
Sbjct 119 ACCGAGATT 127
>seq769035
Length=108
Score = 86.0 bits (94), Expect = 1e-14
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 138 GCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197
|||||||||||||| | | |||||| || ||||||||||||||||||| | |||
Sbjct 80 GCTGAATACATAGGCGTAAGAGGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGG 21
Query 198 AAAAGAAATCAACCGAGATT 217
||||||||||||||||||||
Sbjct 20 AAAAGAAATCAACCGAGATT 1
>seq1971986
Length=127
Score = 75.2 bits (82), Expect = 2e-11
Identities = 80/106 (75%), Gaps = 5/106 (5%)
Strand=Plus/Plus
Query 51 GCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGG 110
|| ||||| ||||| |||||||| ||||||| ||||||||||| |||| || |||||||
Sbjct 1 GCCTGCGAAAAGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGG 60
Query 111 GAAACCCGGCCCTTTG-----GGTCATTGCATGCTGAATACATAGG 151
| | ||| ||| | ||| || | ||||||||||||||
Sbjct 61 GGACCCCAGCCATCATAAGATGGTTATCTTACGCTGAATACATAGG 106
>seq1772359
Length=127
Score = 73.4 bits (80), Expect = 7e-11
Identities = 60/73 (82%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| | || |||||||||||| | | |||||||||| ||||| ||||| ||||| |
Sbjct 75 AGCGCATACGGGGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAA 16
Query 61 AGCTGCGGGGAGT 73
|||| ||||||||
Sbjct 15 AGCTTCGGGGAGT 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 890035114976
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