Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= AAMG01002205.1
Length=300
Score E
Sequences producing significant alignments: (Bits) Value
seq2694932 275 1e-71
seq2541514 273 4e-71
seq2516702 262 7e-68
seq2521474 250 4e-64
seq2551234 190 3e-46
seq2108602 185 1e-44
seq1957059 178 2e-42
seq1831662 172 9e-41
seq450300 168 1e-39
seq674230 159 6e-37
seq2312139 78.8 2e-12
>seq2694932
Length=196
Score = 275 bits (304), Expect = 1e-71
Identities = 158/162 (98%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 139 GCGTTGGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTG 198
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1 GCGTTGGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTG 60
Query 199 GTCTGCGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTG 258
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTCGGGGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTG 120
Query 259 AACTCCTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 300
|||||||||||| |||||||||||||||||||||||||||||
Sbjct 121 AACTCCTGCCGAAGGCTGTGACCCCGCGCCGTGCTACGTCGA 162
>seq2541514
Length=172
Score = 273 bits (302), Expect = 4e-71
Identities = 165/173 (95%), Gaps = 1/173 (1%)
Strand=Plus/Plus
Query 27 GATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGCAAG 86
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 1 GATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGCAAG 60
Query 87 AATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTTGGC 146
||| || | |||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 61 AATGTTTG-CCACCGCAAGAGGATGGGTGACATACGCCTCGCCGCTACGACGGCGTTGGC 119
Query 147 CGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGG 199
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 120 CGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTGG 172
>seq2516702
Length=169
Score = 262 bits (290), Expect = 7e-68
Identities = 161/170 (95%), Gaps = 1/170 (1%)
Strand=Plus/Minus
Query 27 GATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGCAAG 86
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 169 GATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGCAAG 110
Query 87 AATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTTGGC 146
|||||| | ||||||||||||||||||||||||||||||| || || || ||||||||||
Sbjct 109 AATATTTG-CCACCGCAAGAGGATGGGTGACATACGCCTCACCGCTTCGGCGGCGTTGGC 51
Query 147 CGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACC 196
||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 50 CGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACC 1
>seq2521474
Length=169
Score = 250 bits (276), Expect = 4e-64
Identities = 144/148 (97%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 153 GGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTGCGCCGAGGT 212
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 1 GGGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTGGTCTGGGCCGAGGT 60
Query 213 AGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTCCTGCCGATG 272
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 61 AGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTATGAACTCCTGCCGTTG 120
Query 273 GCTGTGACCCCGCGCCGTGCTACGTCGA 300
||||||||||||||||||||||||||||
Sbjct 121 GCTGTGACCCCGCGCCGTGCTACGTCGA 148
>seq2551234
Length=173
Score = 190 bits (210), Expect = 3e-46
Identities = 121/130 (93%), Gaps = 1/130 (1%)
Strand=Plus/Minus
Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83
|||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||
Sbjct 129 TTCGATCACGTCATGCAGCATCGCCGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGC 70
Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTT 143
||||||||| |||||| ||||||||||| |||||||||||||| ||||| || |||||||
Sbjct 69 AAGAATATT-GGCCACGGCAAGAGGATGCGTGACATACGCCTCACCACTGCGGCGGCGTT 11
Query 144 GGCCGTCGTG 153
||||||||||
Sbjct 10 GGCCGTCGTG 1
>seq2108602
Length=127
Score = 185 bits (204), Expect = 1e-44
Identities = 114/122 (93%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 94 GGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTTGGCCGTCGTG 153
|||||| ||||||||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct 4 GGCCACGGCAAGAGGATGCGTGACATACGCCTCACCACTGCGGCGGCGTTGGCCGTCGTG 63
Query 154 GGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTGCGCCGAGGTA 213
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 64 TGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTGGTCTGGGCCGAGGTA 123
Query 214 GG 215
||
Sbjct 124 GG 125
>seq1957059
Length=127
Score = 178 bits (196), Expect = 2e-42
Identities = 104/108 (96%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 193 GACCTGGTCTGCGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 252
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 GACCTGGTCTGGGCCGAGGTAGGTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
Query 253 AGTGTGAACTCCTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 300
||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 AGTGTTAACTCCTGCCGTTGGCTGTGACCCCGCGCCGTGCTACGTCGA 108
>seq1831662
Length=127
Score = 172 bits (190), Expect = 9e-41
Identities = 103/108 (95%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 193 GACCTGGTCTGCGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 252
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 GACCTGGTCTGGGCCGAGGTAGGTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAA 60
Query 253 AGTGTGAACTCCTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 300
||| | ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 AGTATTAACTCCTGCCGTTGGCTGTGACCCCGCGCCGTGCTACGTCGA 108
>seq450300
Length=101
Score = 168 bits (186), Expect = 1e-39
Identities = 98/101 (97%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 155 GCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTGCGCCGAGGTAG 214
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 101 GCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTGGTCTGGGCCGAGGTAG 42
Query 215 GCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGT 255
| |||||||||||||||||||||||||||||||||||||||
Sbjct 41 GTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGT 1
>seq674230
Length=106
Score = 159 bits (176), Expect = 6e-37
Identities = 97/103 (94%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 94 GGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTTGGCCGTCGTG 153
|||||| ||||||||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct 103 GGCCACGGCAAGAGGATGCGTGACATACGCCTCACCACTGCGGCGGCGTTGGCCGTCGTG 44
Query 154 GGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACC 196
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct 43 GGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACC 1
>seq2312139
Length=139
Score = 78.8 bits (86), Expect = 2e-12
Identities = 45/46 (98%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCC 69
|||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 46 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGATGGTCC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 835044906771
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |