Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq2787364 87.8 5e-13
>seq2787364
Length=229
Score = 87.8 bits (96), Expect = 5e-13
Identities = 140/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 38216 GCCCAACAATGCGACTTGGATGTCGGT-GAACTCATTTTCACCGGCGGCGACGTCCATTT 38274
||||| ||||||||| || || || || |||| ||||| |||||| |||
Sbjct 225 GCCCAGCAATGCGACCTG-ATCCCGCACGAGATCATCGTCACCACTGGCGACACCCACGC 167
Query 38275 GTACAAAAATCATCTGGAACA-AGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGC 38333
||||| || || ||||||| | | ||| |||||| ||||| |||| |||||
Sbjct 166 GTACAGCAACCACATGGAACAGATCCGCACT-CAGCTGGCGCGCACGCCGAAAAAGCTGC 108
Query 38334 CGAAGCTTGTGCTGAAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGACGACTTTG 38393
|| | || ||| | || || || || |||| |||| |||||| | | ||| |||||||
Sbjct 107 CGGAACTGGTGATCAAGCGCAAACCTGCGTCGATCTACGACTATAAGTTCGAAGACTTTG 48
Query 38394 AAATCGTCGGCTACGA 38409
||||||||||||||||
Sbjct 47 AAATCGTCGGCTACGA 32
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125848638460150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |