Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_031120.1
Length=241147
Score E
Sequences producing significant alignments: (Bits) Value
seq2871653 95.1 2e-14
seq2871652 86.0 9e-12
>seq2871653
Length=292
Score = 95.1 bits (104), Expect = 2e-14
Identities = 127/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 196184 GACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACTG 196243
||||| ||||||||| | ||||| ||||| || ||| | |||| | ||||||
Sbjct 23 GACGGCTTCCCGCTGCTGACCACCAAGAAGCTTCATTTCAAGAGCATCGCCAACGAACTG 82
Query 196244 CTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTATC 196303
| ||| | | | || ||||||||||||||| || || || ||||| || |||
Sbjct 83 ATCTGGATGTTGAGTGGCAACACCAACATCAAGTGGCTCAACGAAAACGGCGTGAAAATC 142
Query 196304 TGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGG 196360
||| |||| ||||| | |||| ||| ||||||| ||||| ||||| ||||||||
Sbjct 143 TGGGACGAATGGGCCACCGAAGACGGCGACCTGGGCCCGGTGTACGGCGAGCAGTGG 199
>seq2871652
Length=292
Score = 86.0 bits (94), Expect = 9e-12
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 196184 GACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACTG 196243
||||| ||||||||| | ||||| ||||| || ||| | |||| | ||| ||
Sbjct 23 GACGGCTTCCCGCTGCTGACCACCAAGAAGCTTCATTTCAAAAGCATCGCCAACGAATTG 82
Query 196244 CTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTATC 196303
| ||| | | | || | ||||||||||||| ||||| || ||||| || |||
Sbjct 83 ATCTGGATGTTGAGTGGCAATACCAACATCAAGTGGCTGAACGAAAACGGCGTGAAAATC 142
Query 196304 TGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGG 196360
||| |||| ||||| | |||| ||| |||| || ||||| ||||| ||||||||
Sbjct 143 TGGGACGAATGGGCCACCGAAGACGGCGACCTCGGCCCGGTATACGGCGAGCAGTGG 199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741755935132920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |