Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratotherium_20simum_20simum_20[refseq_20GCF_5F000283155.1_202012- 07-31] 3,087 sequences; 2,464,367,180 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 9e-11 >seq21 Length=31534637 Score = 84.2 bits (92), Expect = 9e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || ||||| |||| | ||||| ||||||||| | |||| ||| || ||||| Sbjct 3511600 GCGTTGATGATCTCTTTGATCCGGGGCACGCCCAGGGTGATGTTCATGGAGGCCACGCCT 3511541 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||||||||| |||| || |||| ||| ||| ||||| || |||| |||| Sbjct 3511540 GCAAAGTGGAAAGTCTTCAGCGTCATCTGGGTGCCTGGCTCACCAATGCTCTGG 3511487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084654732882426