Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017
-06-19] 11,479 sequences; 3,438,623,608 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq2702 125 4e-27
seq10354 104 1e-20
>seq2702
Length=10521
Score = 125 bits (138), Expect = 4e-27
Identities = 101/121 (83%), Gaps = 7/121 (6%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTC----AAAATGATAACATC 56
||||||||||||||||||||||| ||||||| || ||||| ||| ||| || ||
Sbjct 9818 GAACCCAAAGACTTTGATTTCTCTCAAGGTGCTGAAGGAGTCGTAAAAACTGACGACCTC 9759
Query 57 GCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116
| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 9758 ---CAATCTCTAGTCGGCATAGTTTATGGTTAGGACTACGACGGTATCTGATCGTCTTCG 9702
Query 117 A 117
|
Sbjct 9701 A 9701
>seq10354
Length=1096
Score = 104 bits (114), Expect = 1e-20
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| |||| ||| |||| ||||| ||||
Sbjct 375 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 434
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| | ||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 435 CATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278370039810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |