Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017 -06-19] 11,479 sequences; 3,438,623,608 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq10900 100 2e-19 seq34 86.0 4e-15 >seq10900 Length=1044 Score = 100 bits (110), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || ||||||||||| |||||||||||||||||||| Sbjct 286 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 229 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 228 TAAT-CAACGCAAGCT 214 >seq34 Length=181543317 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||| | ||||||||||||||||||| Sbjct 150411024 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCAGTGTGTACAAAGGGCAGGGACT 150410967 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 150410966 TAAT-CAACGCAAGCT 150410952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300767629220