Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cervus_20elaphus_20hippelaphus_20[genbank_20GCA_5F002197005.1_202017
-06-19] 11,479 sequences; 3,438,623,608 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq10354 257 2e-66
seq2702 147 2e-33
>seq10354
Length=1096
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 748 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 689
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 688 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 630
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 629 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 570
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 569 TTGGATTTATT 559
>seq2702
Length=10521
Score = 147 bits (162), Expect = 2e-33
Identities = 143/180 (79%), Gaps = 3/180 (2%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACATTACCATGG 71
|||||||||| |||||||||| | ||||||||||| ||||| | ||||| ||| |||||
Sbjct 9456 TTTACTTTGAGAAAATTAGAGTGCTCAAAGCAGGCTTTTGCCTTGAATAGTTTAGCATGG 9515
Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131
||||||| | |||||| | ||||||||||||| ||||| |||| | |||||| |
Sbjct 9516 AATAATAAAGTAGGACTTT-GGTTCTATTTTGTTGGTTT-TAGGTACCAAAGTAATGGTT 9573
Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191
|||| | | ||| ||||| | ||||| || ||||| ||||||||||||| ||||| ||
Sbjct 9574 AATAGGAACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGTT 9633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511943064160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |