Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Condylura_20cristata_20[refseq_20GCF_5F000260355.1_202012-05-01]
2,040 sequences; 1,769,662,895 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq22 159 6e-37
seq10 78.8 2e-12
>seq22
Length=37440533
Score = 159 bits (176), Expect = 6e-37
Identities = 138/171 (81%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181
||||||||| | ||||||||||||| ||||| |||||||||||||| ||||| |||||
Sbjct 35900345 TTCTGCTTCACAACGATAGGAAGAGCCTACATCAAAGGATCAAAAAGCGACGTCACTATG 35900286
Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241
|||||||||| ||||||||||||||| |||| |||||||||||||| ||||| || |
Sbjct 35900285 AACGCTTGGCCGCCACAAGCCAGTTACCCCTATGGTAACTTTTCTGACACCTTGTGCTTA 35900226
Query 242 AAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
||| || | | |||||||| ||||| |||||| ||| ||||||
Sbjct 35900225 AAACCCAGAAGCTCAGAAGGATCGTGAGGCCCTGCTTTCACGGTCTGTATT 35900175
>seq10
Length=59130967
Score = 78.8 bits (86), Expect = 2e-12
Identities = 117/162 (72%), Gaps = 17/162 (10%)
Strand=Plus/Plus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT-TAGTGGGTGAACAATCCAAC 111
||| ||||||| |||||| || |||| |||| ||| ||||||||||||||| |||
Sbjct 26327257 CTGACTCATGATTGTCTAACCCTGGCTCTCGTT---TATATAGTGGGTGAACAATACAAA 26327313
Query 112 GCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAA 171
|||| ||||||||| || ||||||||| || | | ||| || |||||| |
Sbjct 26327314 GCTTGGTGAATTCTGCCTCACAATGATAGGA--AGTCAAGATCAAA----CAAAAA--AT 26327365
Query 172 CGTCGCT-----ATGAACGCTTGGCTGCCACAAGCCAGTTAT 208
|||| | ||||| ||| || |||||||||||||||
Sbjct 26327366 TGTCGATTTAGGATGAAGCCTTAGCCACCACAAGCCAGTTAT 26327407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854382570240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |