Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq194 80.6 1e-12 seq9 75.2 5e-11 >seq194 Length=1894084 Score = 80.6 bits (88), Expect = 1e-12 Identities = 92/120 (77%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| ||||| || ||||||||||||||| || |||| |||||||| ||||| ||| Sbjct 1087770 TGTTAGGACCGGAGAGATGGTGAACTATG--TGGGCAGGGCAAAGCCAGA-GAAACCCTG 1087714 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| | |||||| ||| | |||||| | | |||| | |||||| ||||| || Sbjct 1087713 GTGGAGGTCCATAGCGGTCCTGAC-TGCAAACTGGTGGTCAGACCTGGGTACAGGGGTGA 1087655 >seq9 Length=33421969 Score = 75.2 bits (82), Expect = 5e-11 Identities = 82/110 (75%), Gaps = 7/110 (6%) Strand=Plus/Minus Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106 ||| ||||| ||||||||||||||| | |||||| | | ||||| |||||||| ||||| Sbjct 5782576 GTTATTTGGAAATGCAGCTCTAAATAGATGGTAAACTCCATCTAAGGCTAAATACTGGCC 5782517 Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 | ||||| ||||| | | ||| |||| |||||| |||||| Sbjct 5782516 A-------ATAGCTAACAAGAACAATGACAAAAAGTTGAAAAAAACTTTG 5782474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079854375950