Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq57 95.1 2e-17 seq305 87.8 3e-15 seq117 87.8 3e-15 seq2076 86.0 1e-14 seq35 86.0 1e-14 seq1 78.8 2e-12 seq102 77.0 5e-12 seq130 75.2 2e-11 >seq57 Length=10025392 Score = 95.1 bits (104), Expect = 2e-17 Identities = 91/114 (80%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || | || |||| || || | Sbjct 1956124 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 1956067 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| ||||| || |||||||||||| ||||||||||| Sbjct 1956066 GGGGCGAAGCTACCATCTGTGGGATTCTGACTGAACGCCTCTGAGTCAGAATCC 1956013 >seq305 Length=665376 Score = 87.8 bits (96), Expect = 3e-15 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 |||||||||||| | |||||| | ||||| || | || |||| || || || | Sbjct 292336 GAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGACTGTGCTTGGCTGAGGAGCCAATGGGG 292393 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||||| |||||||| | |||||||||||||||||||||| Sbjct 292394 CGAAGCTACCATCTGTGGGATTATGACCGAACGCCTCTAAGTCAGAATCC 292443 >seq117 Length=3991790 Score = 87.8 bits (96), Expect = 3e-15 Identities = 88/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| |||||||||||| | |||||| | |||| | || | || |||| || || | Sbjct 1216571 GTATGAGAGGAACCGCAGG-TTCAGAC-ATTTGGAGTATGTGCTTGACTGAGGAGCCAAT 1216514 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | |||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1216513 GGGGCGAAGCTACCATCTGTGGGATTATGATTGAACGCCTCTAAGTCAGAAT 1216462 >seq2076 Length=6001 Score = 86.0 bits (94), Expect = 1e-14 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80 |||||| | ||||| | || | || |||| || || || |||||||||||||||| Sbjct 4189 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGT 4247 Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||| |||||||||||||||||||||||| Sbjct 4248 GGGATTATGACTGAACGCCTCTAAGTCAGAATCC 4281 >seq35 Length=16289217 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| ||||||||||| | |||||| | ||||| | || | | |||| || || | Sbjct 6971999 GTACCAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTCGGCTGAGGAGCCAAT 6971942 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | || ||||||||||||| |||||||| |||||||||||||||| ||||||| Sbjct 6971941 GGGGCAAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTTAGAATCC 6971888 >seq1 Length=65909399 Score = 78.8 bits (86), Expect = 2e-12 Identities = 72/91 (79%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90 ||||| | || | || |||| || || || |||||||||||||||| |||||||| Sbjct 11378095 TTGGTGTATGTGCTTGGCTGAGAAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGA 11378036 Query 91 CTGAACGCCTCTAAGTCAGAATCCATGCCAG 121 ||||| |||||||||||||||| || |||| Sbjct 11378035 CTGAATGCCTCTAAGTCAGAATGCAGCCCAG 11378005 >seq102 Length=4551081 Score = 77.0 bits (84), Expect = 5e-12 Identities = 87/114 (76%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 || ||||||||||| | | |||||| | ||||| | || | || ||| || || | Sbjct 4504085 GTCCGAGAGGAACCACAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGGGGAGCCAAT 4504142 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| ||||| | ||| |||||||||||| Sbjct 4504143 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAAAGTCTCCAAGTCAGAATCC 4504196 >seq130 Length=3723025 Score = 75.2 bits (82), Expect = 2e-11 Identities = 59/71 (83%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| || || || || ||||||||||||| |||||||| ||||| |||||||| Sbjct 3717291 TGGCTGAGGAGCCAATGGGGCAAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAA 3717350 Query 105 GTCAGAATCCA 115 ||||||||||| Sbjct 3717351 GTCAGAATCCA 3717361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819146122496