Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eptesicus_20fuscus_20[refseq_20GCF_5F000308155.1_202012-11-08] 6,789 sequences; 2,026,629,342 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7 109 4e-19 seq57 102 6e-17 seq48 102 6e-17 >seq7 Length=35612534 Score = 109 bits (120), Expect = 4e-19 Identities = 94/115 (82%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| || ||||| || || | | ||||| || || ||||||||||||||||| |||| Sbjct 33435846 GTTTAGC-CAGGAAGTTCAGATCACAGAGGCCCGGTGCTTCTACGGCTTCCAGATCGCCA 33435788 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||||| ||||||||||||||||||| | |||||||| || ||||||| ||| Sbjct 33435787 TGGAGAACATCCACTCGGAGATGTACAGCCTGCTCATCGACACCTACATCAAGGA 33435733 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 ||||| || || || ||||| | |||||||||||||| |||| || |||| |||||| Sbjct 33436729 GAGAACCCCCGCCGCTTCGTGGTCTTCCCCATCGAGTACCAGGACATCTGGCAGATGTAC 33436670 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || ||||| || || ||||||||||||| |||||||| Sbjct 33436669 AAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAGGT 33436632 >seq57 Length=10025392 Score = 102 bits (112), Expect = 6e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 |||||| || || ||||| |||||||| || ||||| || || |||| |||||||| Sbjct 79451 GGTATATTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTCTGTTG 79510 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 ||| ||||| ||||| || | ||| ||||| | |||||| || || || ||||| || Sbjct 79511 ATTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTACCTGTCTCTGTCTG 79570 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||| || || | |||||| Sbjct 79571 AGACTCAATAATCGCATACCAAAG 79594 >seq48 Length=11824846 Score = 102 bits (112), Expect = 6e-17 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | || || || |||||||| ||||| || ||| ||| |||||| Sbjct 3080802 CAGGAGGTGCAGGTTCCAGAAGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 3080861 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 || |||||||||||||||||| | || || || || |||||||| |||| Sbjct 3080862 GTTCACTCGGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGAGC 3080910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397535104850960