Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02] 2,167 sequences; 2,391,051,217 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1730 118 6e-25 >seq1730 Length=1141449 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||| | | | |||||||||| | || | ||||||||||||||| || |||||| Sbjct 7117 CCGTT-GCCAGCTTCCCAAAGCCAATCCGGAGA--TCTCACTAAGCCATT-CAATCGGTA 7062 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 7061 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCAAGCT 7012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300793889060