Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20asinus_20[refseq_20GCF_5F001305755.1_202015-10-02]
2,167 sequences; 2,391,051,217 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1730 165 2e-38
seq1064 75.2 2e-11
>seq1730
Length=1141449
Score = 165 bits (182), Expect = 2e-38
Identities = 97/101 (96%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6943 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 7002
Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||||||| |||||||||||||||||||||||||||
Sbjct 7003 CAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 7043
Score = 161 bits (178), Expect = 2e-37
Identities = 117/134 (87%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||| | || | ||||| || || ||| | ||||||||
Sbjct 6202 GAACGAGACCTTAACCTGCTAAATAGACCGGTCGGCTTTTGCTGGCCGCTGTCTTCTTAG 6261
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||| | || | ||| | |||||||||||||||||||||||||||||||||||||
Sbjct 6262 AGGGACTAACAGCGTTTAGCTGTTGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 6321
Query 139 AGATGTTCTGGGCC 152
||||||||||||||
Sbjct 6322 AGATGTTCTGGGCC 6335
>seq1064
Length=3651634
Score = 75.2 bits (82), Expect = 2e-11
Identities = 78/101 (77%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| ||||||| | |||||||||||| ||| | || ||||||| | |||||| ||
Sbjct 1242578 TCGTGATGGGGATCAGGGATTGCAATTATTCCTCATGAAAGAGGAATTTCCAGTAAGTGC 1242637
Query 289 GTGTCATCAGCACGCGTTGATTACG-TCCCTGCCCTTTGTA 328
||| | ||| || ||||||| | ||||||||||||||
Sbjct 1242638 AGGTCGTAAGCTTGCATTGATTAAGCCCCCTGCCCTTTGTA 1242678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947179474176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |