Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq9622 82.4 9e-14 seq9333 82.4 9e-14 seq9327 82.4 9e-14 seq8571 82.4 9e-14 seq8552 82.4 9e-14 seq8365 82.4 9e-14 >seq9622 Length=5338 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 4353 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 4295 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 4294 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 4254 >seq9333 Length=6233 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 5137 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 5079 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 5078 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 5038 >seq9327 Length=6181 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 5225 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 5167 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 5166 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 5126 >seq8571 Length=16777 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 5736 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 5678 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 5677 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 5637 >seq8552 Length=41063 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 28126 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 28184 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 28185 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 28225 >seq8365 Length=226949 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 26380 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 26438 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 26439 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 26479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595144433058