Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Equus_20caballus_20[refseq_20GCF_5F000002305.2_202007-10-29] 9,637 sequences; 2,474,929,062 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 2e-12 >seq1 Length=185838109 Score = 89.7 bits (98), Expect = 2e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || ||||| |||| | ||||| |||||||| | |||| ||| || ||||| Sbjct 65192021 GCGTTGATGATCTCTTTGATCCGGGGCACACCCAGGGTGATGTTCATGGAGGCCACGCCC 65192080 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||||||||| |||| ||||||| |||||| |||||||| |||| |||| Sbjct 65192081 GCAAAGTGGAAAGTCTTTAGGGTCATCTGCGTACCTGGCTCGCCAATGCTCTGG 65192134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084475510459326