Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05]
53,097 sequences; 2,395,954,271 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq7165 174 2e-41
seq9384 122 1e-25
seq1784 73.4 6e-11
>seq7165
Length=42025
Score = 174 bits (192), Expect = 2e-41
Identities = 182/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 17334 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 17277
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 17276 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 17217
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 17216 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 17157
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 17156 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 17104
>seq9384
Length=14792
Score = 122 bits (134), Expect = 1e-25
Identities = 174/236 (74%), Gaps = 12/236 (5%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||| ||||| ||||| ||| |||||| |||||| |
Sbjct 46 GTACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 99
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||| || | | || |||||||| | ||||||||||||| ||||| | |
Sbjct 100 CTCATTCATGGGGAATAATTGCAACCCCCGATCCCCATCACGAATGGGGTTCAACGGGTG 159
Query 121 CCCGGAC--CTGTCGGC-CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
| |||| ||| ||| | |||| || | ||| |||||||||||||||||
Sbjct 160 AC-GGACGCCTGCAGGCGCTGGGTGGGC-ACACCCTGAGCCAGTCAGTGTAGCGCGCGTG 217
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
| |||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 218 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 272
>seq1784
Length=378188
Score = 73.4 bits (80), Expect = 6e-11
Identities = 81/104 (78%), Gaps = 3/104 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGA-CGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59
||||||||||||||| | || |||| || ||||| ||||| || |||||| |||| ||
Sbjct 145258 GTACAAAGGGCAGGGGGCTTAATCAATGCAAGCTT-ATGACCTGCACTTACT-GGAAATT 145201
Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103
|||| || | || || ||||||||| |||||||||||||
Sbjct 145200 CCTCTTTCATGAGGAATAATTGCAATCCCTGATCCCCATCACGA 145157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751613188355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |