Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05]
53,097 sequences; 2,395,954,271 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq7165 174 3e-41
seq9384 161 2e-37
seq1319 82.4 1e-13
>seq7165
Length=42025
Score = 174 bits (192), Expect = 3e-41
Identities = 208/278 (75%), Gaps = 6/278 (2%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 16401 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 16460
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 16461 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 16519
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 16520 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 16579
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 16580 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 16639
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 16640 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 16676
>seq9384
Length=14792
Score = 161 bits (178), Expect = 2e-37
Identities = 209/284 (74%), Gaps = 6/284 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | ||||||||||||||||||||||||
Sbjct 1018 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCAAAGCGTTTACTTTGAAAAAATTAGAGTGT 959
Query 98 TCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 958 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGAC-CGCGG 900
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 899 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 840
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | | |||||
Sbjct 839 GTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAACAAAAGCA 780
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| ||||| |||||||||||||||| |||||||||| || ||
Sbjct 779 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTCAGAGG 737
>seq1319
Length=481703
Score = 82.4 bits (90), Expect = 1e-13
Identities = 134/188 (71%), Gaps = 10/188 (5%)
Strand=Plus/Minus
Query 62 GGAGCCAGGACT-TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---G 117
|| ||||| | | ||||||||||||||||||| ||||||||||||||| || |
Sbjct 212133 GGGGCCAGAAGTGTTTACTTTGAAAAAATTAG--TGTTCAAAGCAGGCCCGAGCCACCTG 212076
Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA 177
|||| | | |||| || || ||||||| | ||||||||||||||||||| | | |
Sbjct 212075 GATACCACAACCAGGAAAAACAGGATAGGACC-GTGGTTCTATTTTGTTGGTTTATGGAA 212017
Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237
| |||||||| |||| || ||||| | |||| | | || |||||||
Sbjct 212016 GGGAGACCATGATTAAAAGGGGCAGCTGGGGGCATTCATATTGCACT---AGGGGTGAAA 211960
Query 238 TTCTTGGA 245
||||||||
Sbjct 211959 TTCTTGGA 211952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914714056256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |