Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05]
53,097 sequences; 2,395,954,271 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq7165 145 3e-32
seq9836 123 1e-25
seq1639 93.3 2e-16
>seq7165
Length=42025
Score = 145 bits (160), Expect = 3e-32
Identities = 104/120 (87%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||||||||||||| |||||||||||| |||| |||||||||||||||||||
Sbjct 22418 TGTTAGGACCCGAAAGATGGGGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 22477
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 22478 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 22537
>seq9836
Length=11799
Score = 123 bits (136), Expect = 1e-25
Identities = 128/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
||||| |||||| |||| ||||||||||||| | || ||| |||||| | | |||||
Sbjct 8834 CCTTCCCGGAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAA 8775
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|||||||| ||| ||||||||||| ||||||| || | ||||| ||||||| |
Sbjct 8774 GGCTAAATACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAA 8715
Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||| | |||||||| || || ||||||| ||| | ||| || ||
Sbjct 8714 CTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 8667
>seq1639
Length=405927
Score = 93.3 bits (102), Expect = 2e-16
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | | || | ||| ||||||||||||| ||||||| |||| ||||||| |
Sbjct 316414 GAGCACATGTCTTAGAACCAAAAAGATGGTGAACCATGCCTGGGCAGGGCAAAGCCAGGG 316473
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||| |||| | ||| || || | ||||||||| || || | ||||||
Sbjct 316474 GAAACTCTGGTGAAGGCCCATAGCAGTCTTGACATGCAAATCGGTCATCTGACCTGGGTA 316533
Query 675 TAGGGGCGA 683
|| ||||||
Sbjct 316534 TAAGGGCGA 316542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078861069350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |