Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05]
53,097 sequences; 2,395,954,271 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq7165 244 2e-62
seq6097 181 2e-43
seq9384 179 6e-43
seq20433 107 3e-21
seq348 100 5e-19
seq203 96.9 6e-18
seq284 87.8 3e-15
seq860 75.2 2e-11
seq853 73.4 6e-11
>seq7165
Length=42025
Score = 244 bits (270), Expect = 2e-62
Identities = 208/251 (83%), Gaps = 9/251 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 17176 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 17118
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130
||| || | |||||| | |||| | |||||||||||||| | | || ||| |
Sbjct 17117 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 17059
Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | | | ||| |||||| | | |||||||||||||||||||||||||||||
Sbjct 17058 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 16999
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 16998 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 16939
Query 248 ATCAATCTGTC 258
|||||||||||
Sbjct 16938 ATCAATCTGTC 16928
>seq6097
Length=66431
Score = 181 bits (200), Expect = 2e-43
Identities = 174/217 (80%), Gaps = 11/217 (5%)
Strand=Plus/Plus
Query 49 AGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTC 108
||||||||||||||||||||||| |||| ||| | ||||| | ||| | |||||||
Sbjct 38014 AGGGCATCACAGACCTGTTATTGT-TCAATCTTGGGT-GGCTGAACGCCGCTTGTCCCTC 38071
Query 109 TAAGAAGCCAGC---CACCAAC--CATAGTCGATGGGG---CTATTTAGCAGGTTAAGGT 160
||||||| | | || || | || ||| | | ||| |||||| | || ||
Sbjct 38072 TAAGAAGTTGGGGGACGCCTACGGCTCAGG-GATCGCGTAACTAGTTAGCATGCTAGAGT 38130
Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220
||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 38131 CTCTTTCGTTATGGGAATTAACCAGACAAATCACTCCACCAGCTAAGAACGGCCATGCAC 38190
Query 221 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
||||||||| ||||| ||||||||||||||||||||
Sbjct 38191 CACCACCCACGGAATCGAGAAAGAGCTATCAATCTGT 38227
>seq9384
Length=14792
Score = 179 bits (198), Expect = 6e-43
Identities = 214/296 (72%), Gaps = 56/296 (19%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC-- 72
||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||
Sbjct 200 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTC 259
Query 73 ------------CTCAA----ACTT--CCAT---------------------TGGCTGGA 93
|| || |||| || | |||||| |
Sbjct 260 AATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGTCTTGGGTGGCTGAA 319
Query 94 AGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCATAGTCGATGGGG--------C 142
|||| | |||||||||||||| | |||| || | ||| |||| |
Sbjct 320 TGCCACTTGTCCCTCTAAGAAGTTGGGGGACACCGAC--TGCTCG--GGGGTTGCGTAAC 375
Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202
|| |||||| | | |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 376 TAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAA 435
Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||
Sbjct 436 CTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTATC 491
>seq20433
Length=1608
Score = 107 bits (118), Expect = 3e-21
Identities = 176/245 (72%), Gaps = 24/245 (10%)
Strand=Plus/Plus
Query 25 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCA 84
||||| || |||| || | ||| |||||||||||| | ||||||||| |||| | |
Sbjct 604 CGCGCACGCAGCCCCGACC-TCTCAGGGCATCACAGGCTTGTTATTGC-TCAATCC-CGG 660
Query 85 TTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCATAGTCGATGGGG-- 141
|||||| ||| | | ||||||||||||| || || || | | |||||
Sbjct 661 GTGGCTG-AAGACTTT--TCCCTCTAAGAAGTTGAGGGACG---CAGACTGCTTGGGGGG 714
Query 142 --------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
||| |||||| | || ||||| || |||||||||||||| |||| ||
Sbjct 715 TCACGTAACTAGTTAGCACGCTAGAGTCTCCTTGTTTATCGGAATTAACGGGACAG-TCG 773
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
||||||||||||||||| ||| | ||||||| || ||||||||||||||||| ||||
Sbjct 774 CTCCACCAACTAAGAACAGCCCTACACCACC---CACAGAATCAAGAAAGAGCTGTCAAC 830
Query 254 CTGTC 258
|| ||
Sbjct 831 CTCTC 835
>seq348
Length=1053823
Score = 100 bits (110), Expect = 5e-19
Identities = 175/252 (69%), Gaps = 12/252 (5%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|| ||||||| || ||| || | ||||||||||||| | ||||||||||||| ||
Sbjct 50310 GTTAGTGTAGTGCC--TGCAAACCGGGACATCTAAGGGCAGCCCAGACCTGTTATTTGCT 50367
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC---ACCAACCATA 131
|||| | |||||| | || | |||||||| ||||| | |||| |
Sbjct 50368 TAAACCTTGGGTGGCTGAACAGCACTTGTCCCTCTGAGAAGTTGGAGGATACCACTGCTT 50427
Query 132 G-----TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186
| || || ||| |||||| | |||| ||| |||||| ||| || || ||
Sbjct 50428 GGAGGTTCCATAA--CTAGTTAGCATGCCTGAGTCTTGTTTGTTATCAGAACTAGCCCGA 50485
Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246
||||| ||| |||||||||||| ||||| | | |||||| || ||| |||||||||
Sbjct 50486 CAAATGGCTCTACCAACTAAGAATGGCCACACTCTACCACCTATGGAACAGAGAAAGAGC 50545
Query 247 TATCAATCTGTC 258
|||||| |||||
Sbjct 50546 TATCAACCTGTC 50557
>seq203
Length=1332455
Score = 96.9 bits (106), Expect = 6e-18
Identities = 124/167 (74%), Gaps = 8/167 (5%)
Strand=Plus/Minus
Query 31 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCT 90
||| || | ||| | ||||||||||||| ||||||||||||| ||| || | | |||||
Sbjct 212220 TGCAGCTCTGAATGTTTAAGGGCATCACAAACCTGTTATTGCC-CAATCT-CTAGTGGCT 212163
Query 91 GGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA--CCAACCATAGTCG----ATGGGGCTA 144
||| ||| | ||||||||||||| | || ||||||| | | ||| |||
Sbjct 212162 GGATACCACTTATCCCTCTAAGAAGTTGGGCATGCCAACCACTTTGGGGTCATGTAACTA 212103
Query 145 TTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191
|||||| | | ||||| || |||||| |||||||||||||||||
Sbjct 212102 GTTAGCATGCTGCAGTCTCATTTGTTATCAGAATTAACCAGACAAAT 212056
>seq284
Length=1169891
Score = 87.8 bits (96), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 19/191 (10%)
Strand=Plus/Minus
Query 45 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTC 104
||||| ||||||| |||||||||||||| |||| ||| |||||| | | |||
Sbjct 551298 TCTAAAGGCATCATAGACCTGTTATTGC-TCAATCTTGG--TGGCTGAAC-----TTGTC 551247
Query 105 CCTCTAAGAAGCCAGCCA---CCAACCATAGTCGATGGGG------CTATTTAGCAGGTT 155
|||||||| || | ||||| | || | || ||| |||||| |
Sbjct 551246 CCTCTAAGGAGTTGGAGGATGCCAAC--TGCTCCAGGGTTGCATAACTAGTTAGCATGCC 551189
Query 156 AAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCA 215
| |||||| | |||| |||||||| ||||||||| ||||||||||||||||| ||||
Sbjct 551188 AGGGTCTCCCTAGTTACAGGAATTAAACAGACAAATTGCTCCACCAACTAAGAACAGCCA 551129
Query 216 TGCACCACCAC 226
|||| ||||||
Sbjct 551128 TGCAACACCAC 551118
>seq860
Length=655802
Score = 75.2 bits (82), Expect = 2e-11
Identities = 70/89 (79%), Gaps = 10/89 (11%)
Strand=Plus/Minus
Query 165 TTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 224
|| |||||| | | | ||||||||||||||||||||| |||| ||||||| ||||||
Sbjct 438700 TTGGTTATCAGTA--AGCCAGACAAATCACTCCACCAATGCAGAAAGGCCATGTACCACC 438643
Query 225 ACCCATAGAATCAAGAAAGAGCTATCAAT 253
||| ||||||||||||||||||
Sbjct 438642 ACC--------CAAGAAAGAGCTATCAAT 438622
>seq853
Length=656808
Score = 73.4 bits (80), Expect = 6e-11
Identities = 82/104 (79%), Gaps = 7/104 (7%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAA-TCACTCCACCAACTAAGAACGGCCATG 217
|||||||| |||| |||| |||||||||| || || |||||||||| | ||||||
Sbjct 503900 GTCTCGTT---TATCACAATTCACCAGACAAAATCGCTTCACCAACTAAAACTGGCCATA 503844
Query 218 CACCACC-ACCCATAGAATCAAGAAAGAGCTATCAA-TCTGTCC 259
| ||||| ||||| ||| | |||||||||||||| ||||||
Sbjct 503843 CCCCACCCACCCACGCAATGA-GAAAGAGCTATCAACCCTGTCC 503801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796390144257
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |