Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05]
53,097 sequences; 2,395,954,271 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq7165 351 2e-94
seq26482 331 2e-88
seq958 203 6e-50
seq2015 190 3e-46
seq596 167 4e-39
seq35822 100 5e-19
seq13376 95.1 2e-17
seq53 75.2 2e-11
>seq7165
Length=42025
Score = 351 bits (388), Expect = 2e-94
Identities = 255/294 (87%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 30303 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 30244
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 30243 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 30184
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 30183 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 30124
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 30123 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 30064
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 30063 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 30010
>seq26482
Length=1300
Score = 331 bits (366), Expect = 2e-88
Identities = 231/263 (88%), Gaps = 0/263 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||||
Sbjct 81 TCATCAATAGGGTAAAACTAACTTGTCTCACGATGGTCTAAACCCAGCTCACGTTCCCTA 140
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 141 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 200
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 201 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 260
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||| |||||| || | ||| | | || | |||||||| |||
Sbjct 261 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCCTAAGGTCAGAAGGATCGTGAGG 320
Query 271 CCACACTTTCATGGTTTGTATTC 293
|| | |||||| || |||||||
Sbjct 321 CCCCGCTTTCACCGTCTGTATTC 343
>seq958
Length=614857
Score = 203 bits (224), Expect = 6e-50
Identities = 189/240 (79%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
||||| |||| || |||||||| | ||| || ||||||| |||||||| | ||||| ||
Sbjct 127017 ATCAGGAGGGAAACACTAACCTATTTCACGAGGGTCTAATGCCAGCTCATGCTCCCTGTT 126958
Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152
| | ||||||||||||||||| |||||||| ||| | |||||||||||||||||
Sbjct 126957 GGCAGATGAACAATCCAACGCTTGGTGAATTCTGTTTCACAACGATAGGAAGAGCCGACA 126898
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
| |||||||||||||| || ||||||||| |||||||||||||||||| |||||||
Sbjct 126897 TTGAAGGATCAAAAAGTGACACTGCTATGAACATTTGGCTGCCACAAGCCAGCTATCCCT 126838
Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272
||||||||| ||||| || ||| || | ||| | || | |||||||| |||||
Sbjct 126837 GTGGTAACTCTTCTGACATCTCCCGCTTAAAACCCAAAAGGTCAGAAGGATCGTGAGGCC 126778
>seq2015
Length=341399
Score = 190 bits (210), Expect = 3e-46
Identities = 117/125 (94%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 78 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 332099 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGA 332040
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 332039 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCAC 331980
Query 198 AAGCC 202
|||||
Sbjct 331979 AAGCC 331975
>seq596
Length=809796
Score = 167 bits (184), Expect = 4e-39
Identities = 193/259 (75%), Gaps = 6/259 (2%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||| |||||||||| ||| ||||||||||| |||| |||||||||| ||| | |
Sbjct 804740 CATCAGTGGGGTAAAACTGCCCTATCTCATGACGGCCTAATCCCAGCTCACATTCTC-AC 804682
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||| ||||| || ||| ||| |||||||| |||| |||||| |
Sbjct 804681 TAGTGGGTGGTCAATCTGACACTTGATGAAGTCTGCTTCACAATGA-----AGAGCCAAT 804627
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
| | ||||| |||||| | || ||||||||| |||||| | || |||||||||||
Sbjct 804626 AGCTAAGGACTAAAAAGAAGAGTTGCTATGAACACTTGGCCATCCCATTCCAGTTATCCC 804567
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
|||| ||||||||||| ||||||| || | | || || | | | |||||| | ||||
Sbjct 804566 TGTGATAACTTTTCTGACACCTCTTGCTTAAGATGTCAAAGATCAGAAGGATGGCGAGGC 804507
Query 272 CACACTTTCATGGTTTGTA 290
| |||||| || ||||
Sbjct 804506 CCTGCTTTCACAGTCTGTA 804488
>seq35822
Length=1053
Score = 100 bits (110), Expect = 5e-19
Identities = 192/284 (68%), Gaps = 37/284 (13%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT------ 85
||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 603 CATCATTAGAGTAAAACCAACCTGTCTCATGAAGGTCTAAACCCAGCTCATGTTGAGTGA 662
Query 86 --------------CCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC- 130
| || |||||| |||||| |||||| | | ||||||| ||||
Sbjct 663 AGATCTAAACCCAGCTCTGTTAGTGAGTGAACCATCCAATGATAGGTGAATTCTCCTTCA 722
Query 131 --GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTT 188
|| || || ||| |||||| ||||| ||||||| | | || |||| ||||
Sbjct 723 CAGGAATAGCAGAAAG---TGACATC-AAGGACCAAAAAGTGAGAT--CTCTGAATGCTT 776
Query 189 GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 248
||| ||| ||||||| | |||||||||||||| |||||| || | ||| |
Sbjct 777 GGCCGCCCAAAGCCAG-------TATGGTAACTTTTCTGACACCTCCTGCTTGAAA-CTA 828
Query 249 GAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
| || || | | | | ||||| |||||| ||| ||||||
Sbjct 829 AAAAGATTAGAAGGTTGGGAGGCCCTGCTTTCAGGGTCTGTATT 872
>seq13376
Length=3610
Score = 95.1 bits (104), Expect = 2e-17
Identities = 191/284 (67%), Gaps = 37/284 (13%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT------ 85
||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 2113 CATCATTAGAGTAAAACCAACCTGTCTCATGAAGGTCTAAACCCAGCTCATGTTGAGTGA 2172
Query 86 --------------CCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC- 130
| || |||||| |||||| |||||| | | ||||||| ||||
Sbjct 2173 AGATCTAAACCCAGCTCTGTTAGTGAGTGAACCATCCAATGATAGGTGAATTCTCCTTCA 2232
Query 131 --GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTT 188
|| || || ||| |||||| ||||| ||||||| | | | |||| ||||
Sbjct 2233 CAGGAATAGCAGAAAG---TGACATC-AAGGACCAAAAAGTGAGAT--TTCTGAATGCTT 2286
Query 189 GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 248
||| ||| ||||||| | |||||||||||||| |||||| || | ||| |
Sbjct 2287 GGCCGCCCAAAGCCAG-------TATGGTAACTTTTCTGACACCTCCTGCTTGAAA-CTA 2338
Query 249 GAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292
| || || | | | | ||||| |||||| ||| ||||||
Sbjct 2339 AAAAGATTAGAAGGTTGGGAGGCCCTGCTTTCAGGGTCTGTATT 2382
>seq53
Length=2238217
Score = 75.2 bits (82), Expect = 2e-11
Identities = 68/86 (79%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 142 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201
||||| | ||| ||||||||||||| || || || || | || ||||||||| |
Sbjct 2180420 AAGAGACTACACTGAAGGATCAAAAATGAATGTTTCTCTGCTTGGTTATCTGCCACAAAC 2180361
Query 202 CAGTTATCCCTGTGGTAACTTTTCTG 227
| ||||||||||||||||||||||||
Sbjct 2180360 CGGTTATCCCTGTGGTAACTTTTCTG 2180335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853946339232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |