Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05]
53,097 sequences; 2,395,954,271 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq7165 197 3e-48
seq9384 147 4e-33
seq1784 80.6 5e-13
>seq7165
Length=42025
Score = 197 bits (218), Expect = 3e-48
Identities = 201/258 (78%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 17078 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 17135
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || | |
Sbjct 17136 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 17195
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | | ||||
Sbjct 17196 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTG 17255
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||
Sbjct 17256 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 17315
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 17316 AAGTCCCTGCCCTTTGTA 17333
>seq9384
Length=14792
Score = 147 bits (162), Expect = 4e-33
Identities = 192/259 (74%), Gaps = 9/259 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 298 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 241
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || | || | ||
Sbjct 240 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGGGTGTGC-CCA 182
Query 191 CCTTG-GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
|| | ||| | ||| | || | | | || | | ||||| ||||||| | | ||
Sbjct 181 CCCAGCGCCTGCAGGCGTCCGTCACCCGTTGAACCCCATTCGTGATGGGGATCGGGGGTT 122
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||||| | | | || ||||||| || |||||| ||| ||||| ||| ||| |
Sbjct 121 GCAATTATTCCCCATGAATGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCG----T 66
Query 310 TACGTCCCTGCCCTTTGTA 328
|| ||||||||||||||||
Sbjct 65 TAAGTCCCTGCCCTTTGTA 47
>seq1784
Length=378188
Score = 80.6 bits (88), Expect = 5e-13
Identities = 79/101 (78%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| ||||||| | |||||||||||| ||| | || ||||||| | |||||| ||
Sbjct 145157 TCGTGATGGGGATCAGGGATTGCAATTATTCCTCATGAAAGAGGAATTTCCAGTAAGTGC 145216
Query 289 GTGTCATCAGCACGCGTTGATTACG-TCCCTGCCCTTTGTA 328
||||| ||| || ||||||| | ||||||||||||||
Sbjct 145217 AGGTCATAAGCTTGCATTGATTAAGCCCCCTGCCCTTTGTA 145257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946697065216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |