Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Equus_20przewalskii_20[refseq_20GCF_5F000696695.1_202014-06-05]
53,097 sequences; 2,395,954,271 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq26482 379 7e-103
seq7165 345 1e-92
seq7023 311 3e-82
seq2093 241 4e-61
seq355 239 1e-60
seq1546 185 3e-44
seq13376 176 1e-41
seq302 154 5e-35
seq1028 86.0 2e-14
>seq26482
Length=1300
Score = 379 bits (420), Expect = 7e-103
Identities = 276/329 (84%), Gaps = 32/329 (10%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|| |||||| |||||||||||||| ||| ||||| | | | ||||||||||||||||||
Sbjct 673 CTTCCACTTGTTCTACACCTCTCATGTCTCTTCACCATGCCAGACTAGAGTCAAGCTCAA 732
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 733 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTGCCTTGGCTGTGGTTTCGCTGG 792
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||| || ||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 793 ATAACAGTTAGGGACAGTGGGAATCTCCTTCATCCATTCATGCGCGTCACTAATTAGATG 852
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 912
Query 477 TTGAA--------------------------------TTTCTTCACTTTGACATTCAGAG 504
||||| |||||||||||||||||||||||
Sbjct 913 TTGAAGTACTCCCGCCATCTACTCGCGCTTCATTGACTTTCTTCACTTTGACATTCAGAG 972
Query 505 CACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||| | ||||||
Sbjct 973 CACTGGGCAGAAATCACATCACTTCAACA 1001
Score = 113 bits (124), Expect = 1e-22
Identities = 86/102 (84%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 377 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 436
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108
|||| |||| ||| ||||||||| ||||||||||||||| ||
Sbjct 437 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCA 478
>seq7165
Length=42025
Score = 345 bits (382), Expect = 1e-92
Identities = 200/206 (97%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 29379 GCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGTTC 29320
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 29319 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 29260
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 29259 AGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCAC 29200
Query 508 TGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||| |||||||||
Sbjct 29199 TGGGCAGAAATCACATCGCGTCAACA 29174
Score = 306 bits (338), Expect = 1e-80
Identities = 186/197 (94%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 29576 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 29517
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 29516 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 29457
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 29456 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 29397
Query 417 ACGAGGCATTTGGCTAC 433
|||||||||||||||||
Sbjct 29396 ACGAGGCATTTGGCTAC 29380
Score = 118 bits (130), Expect = 3e-24
Identities = 103/128 (80%), Gaps = 5/128 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 29976 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 29917
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 29916 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 29862
Query 127 GGCCCGCG 134
|| ||||
Sbjct 29861 GGGTCGCG 29854
>seq7023
Length=45024
Score = 311 bits (344), Expect = 3e-82
Identities = 247/297 (83%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||| || ||||| ||||| ||||||| | ||||| | | |||||||||||||||| |
Sbjct 38854 CTCTCATTTATTATACACTTCTCAAGGCTCTTCACTGTGCCAGACTAGAGTCAAGCTCTA 38913
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|| |||||| ||||||| |||||||| ||||||| ||||||||| |||| |||| ||| |
Sbjct 38914 CAAGGTCTTATTTCCCCACTGATTCCACCAAGCCTGTTCCCTTGACTGTAGTTTTGCTGG 38973
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
|||||| |||| | |||||||||| ||| || |||||| | ||||||||||||||
Sbjct 38974 GTAGTAGGTAGGAATTGTGGGAATCTTGTTTATTCATTCACATGTATCACTAATTAGATG 39033
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
| ||||||||||||||||||||| ||||||||||||||| || |||||| | ||||
Sbjct 39034 ATGAGGCATTTGGCTACCTTAAGGTGGTCATAGTTACTCCCACCATTTACCTGTGCTTCA 39093
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||| |||||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct 39094 TTGAATTTCTTCATTTTGACTTTCAGAGCACTAGGCAGAAATCATATTGCATCAACA 39150
>seq2093
Length=329953
Score = 241 bits (266), Expect = 4e-61
Identities = 198/237 (84%), Gaps = 7/237 (3%)
Strand=Plus/Plus
Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344
||| ||||||||| |||||| |||| |||||||| || |||| ||| ||||||||
Sbjct 288308 AGTTAAGCTCAACCAGGTCTT---TCCCTGCTGATTCTGCAAAGCTAGTTGTCTTGGCTG 288364
Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404
|| |||| |||| || ||| ||||||| ||||||||| ||| |||||||||| || ||
Sbjct 288365 TG-TTTCACTAGTTACTAGGTAGGGACCTTGGGAATCTTGTTCATCCATTCATAAGCATC 288423
Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464
| || |||||||| |||||||||||||||||| ||||||||||||||||||| | ||
Sbjct 288424 ATTATTTAGATGATGAGGCATTTGGCTACCTT--GAGAGTCATAGTTACTCCCTGTG-TT 288480
Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521
|||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 288481 ACCCTCACTTCATTGAATTTCTTCACTATGACATTCAGAGCACTGGGCAGAAATCAC 288537
>seq355
Length=1043905
Score = 239 bits (264), Expect = 1e-60
Identities = 162/182 (89%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 336 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395
||||||||||||||| ||| |||||||| ||||||||||||||||| ||| ||||||||
Sbjct 467387 CCTTGGCTGTGGTTTTGCTGGATAGTAGGTAGGGACAGTGGGAATCGTGTTCATCCATTC 467446
Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455
|||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 467447 ATGCGCATCACTACTTAGATGACGAGGCATTTGGCTACCTCGAGAGAGTCATAGTTACTC 467506
Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515
||||| ||| |||| ||| ||||||||| |||||||||||||||||| ||||||||
Sbjct 467507 CCGCCATTTGCCCGTGCTCCACTGAATTTCTGTACTTTGACATTCAGAGCAGTGGGCAGA 467566
Query 516 AA 517
||
Sbjct 467567 AA 467568
>seq1546
Length=424993
Score = 185 bits (204), Expect = 3e-44
Identities = 216/288 (75%), Gaps = 3/288 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCA 295
|||||||||| |||||||||| | | ||||| | | | || || | ||||| ||
Sbjct 384531 CTCCCACTTAATCTACACCTCCTGTGCCTCTTCACCATGCCAGGTTTACAATCAAGTGCA 384472
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
||| ||||||| ||| | |||| ||| |||| | ||| |||||| |||| |
Sbjct 384471 GCAGAGTCTTCTCGGCCCACAGATTTTGCCCAGCCA-TCCCCCTGGCTGCAGTTTTATCA 384413
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
||| ||| || |||| ||||| || || || ||||||||| ||| |||| |||||
Sbjct 384412 AATAATAGGTAAAGACAACAGGAATATCATTCATTCATTCATGCATGTCCCTAACTAGAT 384353
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GCCGTTTACCCGCGCTT 474
| ||||||||||||||||||||||||||||| ||||| ||| | | |||| | | ||
Sbjct 384352 GGTGAGGCATTTGGCTACCTTAAGAGAGTCATGGTTACACCCATCAATCTACCTGGGTTT 384293
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522
| |||||||||||||||||||||||||||||||||| |||| |||
Sbjct 384292 CAGTAAATTTCTTCACTTTGACATTCAGAGCACTGGGCAAAAATAACA 384245
>seq13376
Length=3610
Score = 176 bits (194), Expect = 1e-41
Identities = 220/297 (74%), Gaps = 20/297 (7%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||| |||||||||||||| ||||| || ||||| | ||||||||||| ||||||
Sbjct 2552 CTCTCACTTATTCTACACTTCTCA-GTATCTTCACTGTCACAGACTAGAGTCATGCTCAA 2610
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT--CCCTTGGCTGTGGTTTCGCT 354
||||||| ||||| |||||||| ||| | | || ||||| || || ||||| ||
Sbjct 2611 CAGGGTCGTCTTTGTAAGCTGATTCTCTCAAACTCATTGCCCCTTAGCCGTAGTTTCACT 2670
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
|| || |||| |||||| ||| || | ||||||| ||| |||||||||
Sbjct 2671 AG------------GATAGTGAGAATCTTGTTCATTCGTTCATGCATGTCTCTAATTAGA 2718
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
|| | |||||||| ||||||||||| ||| || ||||| | ||| |||||| || ||
Sbjct 2719 TGGTGGGGCATTTGTCTACCTTAAGACAGT--TAATTACT-CTGCCATTTACCTGC-TTT 2774
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
|||| ||| ||| || |||||| | |||||||| ||||||||||||| | ||||
Sbjct 2775 CATTGAGTTT-TTCTCTCTGACATAGAAAGCACTGGACAGAAATCACATTACATCAA 2830
>seq302
Length=1125099
Score = 154 bits (170), Expect = 5e-35
Identities = 120/143 (84%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298
|||||| | |||||||||||| ||| ||||| | | || ||||||||||||||||
Sbjct 347381 CCCACTCGTCCTACACCTCTCATGTCTCTTCACCGTGCCAGAACAGAGTCAAGCTCAACA 347440
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
|||||||||||| |||||||||| ||||| |||| ||||| |||||||| |||||| |||
Sbjct 347441 GGGTCTTCTTTCTCCGCTGATTCTGCCAAACCCGCTCCCTCGGCTGTGGGTTCGCTGGAT 347500
Query 359 AGTAGATAGGGACAGTGGGAATC 381
|||| ||| |||||||||||||
Sbjct 347501 AGTACGTAGCGACAGTGGGAATC 347523
>seq1028
Length=584436
Score = 86.0 bits (94), Expect = 2e-14
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392
||| ||||||||| ||||| || |||||||| ||||||||||||||||||| ||||||||
Sbjct 548111 TTCTCTTGGCTGTAGTTTCTCTGGATAGTAGGTAGGGACAGTGGGAATCTCATTAATCCA 548052
Query 393 TT 394
||
Sbjct 548051 TT 548050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634331757856
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