Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2 141 4e-31
seq538 127 9e-27
seq404 125 3e-26
seq59 125 3e-26
seq83 122 4e-25
seq226 109 2e-21
seq749 105 3e-20
seq198 104 1e-19
seq115 95.1 5e-17
seq525 93.3 2e-16
seq308 93.3 2e-16
seq1 93.3 2e-16
seq1239 91.5 6e-16
seq195 91.5 6e-16
seq845 87.8 7e-15
seq1172 86.0 3e-14
seq826 82.4 3e-13
seq7 75.2 5e-11
>seq2
Length=16010500
Score = 141 bits (156), Expect = 4e-31
Identities = 113/135 (84%), Gaps = 1/135 (1%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | |||| || |||| |||||||||||||||||||||||||||| |||| || |
Sbjct 8897003 GAGCACGAGCGTACGTGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGA-G 8896945
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || |||||| ||| ||||||||| | ||||| |
Sbjct 8896944 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATTGGTCGTCCGACA 8896885
Query 669 TGGGTATAGGGGCGA 683
|||||||||||||||
Sbjct 8896884 TGGGTATAGGGGCGA 8896870
>seq538
Length=1665627
Score = 127 bits (140), Expect = 9e-27
Identities = 109/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | |||| || |||| |||||| ||||||||||||||||||||| |||| |||
Sbjct 335926 GAGCACGAGCGTATGTGTTAGGACCCAAAAGATGGTGAACTATGCCTGGGCAGGGCAAAG 335867
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| | || ||| ||| ||||||||| | ||||| |
Sbjct 335866 CCAGAGGAAACTCTGGTGGAGGTCCATAGTGGTCCTGACGTGCAAATTGGTCGTCTGACC 335807
Query 669 TGGGTATAGGGGCGA 683
|||| ||||||||||
Sbjct 335806 TGGGGATAGGGGCGA 335792
>seq404
Length=2183755
Score = 125 bits (138), Expect = 3e-26
Identities = 110/136 (81%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | ||||||| ||||| ||||||||||||||||||||||||||| |||| |||
Sbjct 1718064 GAGCACGAGCATATCTGTTAAGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCAAAG 1718123
Query 609 CCAGAGGAAACTCTGGTGGAGG-CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667
|||||||||||||||||| ||| | | |||||| ||| ||||||||| || ||| |
Sbjct 1718124 CCAGAGGAAACTCTGGTGAAGGTCCCTTAGCGGTCCTGATGTGCAAATCAGTCATCAGAC 1718183
Query 668 TTGGGTATAGGGGCGA 683
||||||||| || ||
Sbjct 1718184 CTGGGTATAGAGGTGA 1718199
>seq59
Length=6325068
Score = 125 bits (138), Expect = 3e-26
Identities = 107/132 (81%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | |||| || |||| ||||| |||||||||||||||||||||| |||| ||||
Sbjct 306688 GAGCACGAGCGTATGTGTTAGGACCTGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAG 306629
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || || ||| ||| | ||||||||| ||||| |
Sbjct 306628 CCAGAGGAAACTCTGGTGGAGGTCCGTAGTGGTCCTGACATGCAAATCGGTCGTCCGACC 306569
Query 669 TGGGTATAGGGG 680
|||||| || ||
Sbjct 306568 TGGGTAGAGAGG 306557
>seq83
Length=5509936
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||||||||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 4199417 GAGTCGAGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 4199358
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| |||| || || | ||||| ||||||| |||||| |
Sbjct 4199357 ACCGGCACGAGACCGATAGTCAACAAATACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 4199298
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 4199297 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 4199258
>seq226
Length=3478930
Score = 109 bits (120), Expect = 2e-21
Identities = 81/95 (85%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 589 TATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCG 648
|||||||| |||| |||||||||||||||||||||||||| || |||||| ||| ||
Sbjct 407178 TATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACG 407119
Query 649 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||| ||||| | |||||||||||||||
Sbjct 407118 TGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 407084
Score = 75.2 bits (82), Expect = 5e-11
Identities = 71/91 (78%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 75 AGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGA 134
||||||| | | ||||| |||||||| ||| ||||||||||| ||||||| || |
Sbjct 407035 AGGTAAACTCCATCTAAGGCTAAATACCGGCACGAGACCGATAGTCAACAAGTACCGTAA 406976
Query 135 TCGAAAGATGAAAAGCACTTTGGAAAGAGAG 165
||||| ||||||| |||||| | ||||||
Sbjct 406975 GGGAAAGTTGAAAAGAACTTTGAAGAGAGAG 406945
>seq749
Length=972768
Score = 105 bits (116), Expect = 3e-20
Identities = 76/88 (86%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635
||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
Sbjct 185611 AAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGATCTGT 185552
Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTC 663
|||||| ||| ||||||||||| |||||
Sbjct 185551 AGCGGTCCTGACGTGCAAATCGGTCGTC 185524
>seq198
Length=3721735
Score = 104 bits (114), Expect = 1e-19
Identities = 116/154 (75%), Gaps = 1/154 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| | |||| | | ||||| |||||||
Sbjct 2284314 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGATAAACTCCATCTAAGGCTAAAT 2284255
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| | || |||| ||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 2284254 ACCCG-CACAGACAGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 2284196
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
|||||||| || || ||||||| ||| | |||
Sbjct 2284195 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGG 2284162
>seq115
Length=4841617
Score = 95.1 bits (104), Expect = 5e-17
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | ||| || |||||| | | ||||| |||||||
Sbjct 921441 GAGTCGTGTTGCTTGGGAATGCAGCCCAAAACAGGTGGTAAACTCCATCTAAGGCTAAAT 921500
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
| |||| ||||| ||||| ||||||| | | ||||| ||||||| ||||||
Sbjct 921501 ACTGGCACGAGACTGATAGTCAACAAGTACCATAAGGGAAAGTTGAAAAGAACTTTG 921557
>seq525
Length=1586369
Score = 93.3 bits (102), Expect = 2e-16
Identities = 98/128 (77%), Gaps = 1/128 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||
Sbjct 892698 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGACTAAAT 892639
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||| ||||| ||||||| || | ||||| ||||||| ||||| |
Sbjct 892638 ACCGGCACGAGACTGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTT-AAG 892580
Query 160 AGAGAGTT 167
||||||||
Sbjct 892579 AGAGAGTT 892572
>seq308
Length=2802114
Score = 93.3 bits (102), Expect = 2e-16
Identities = 96/126 (76%), Gaps = 5/126 (4%)
Strand=Plus/Minus
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
|||| |||| ||||| ||||||||||||| |||||||| | | ||||||||||||
Sbjct 506454 CATATGTGTTAGGACCTGAAAGATGGTGAAATATGCCTGGACA-----AAGCCAGAGGAA 506400
Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677
|||| |||||||| | || ||| ||| | ||||||| | | || | |||||||||
Sbjct 506399 ACTCAGGTGGAGGTCCATAGTGGTCCTGACATGCAAATTGGTTGTACGACCTGGGTATAG 506340
Query 678 GGGCGA 683
||| ||
Sbjct 506339 GGGTGA 506334
>seq1
Length=17429815
Score = 93.3 bits (102), Expect = 2e-16
Identities = 101/133 (76%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
||||| ||||| |||| ||||||||||||| | ||| ||| |||||| | | |||||
Sbjct 15421431 CCTTCCTAGAGTCAGGTTGCTTGGGAATGCAGCCCAAAACGGGTGGTAAACTCCATCTAA 15421372
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|||||||| || |||||| | || ||||||| ||| | ||||| ||||||| |
Sbjct 15421371 GGCTAAATACCAGCACGAGACCAACAGTCAACAAGTACAGTAAGTGAAAGTTGAAAAGAA 15421312
Query 152 CTTTGGAAAGAGA 164
||||| ||||||
Sbjct 15421311 CTTTG--AAGAGA 15421301
>seq1239
Length=326292
Score = 91.5 bits (100), Expect = 6e-16
Identities = 106/142 (75%), Gaps = 1/142 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| ||||| ||||||||||||| | || ||| |||||||| | |||||||||||||
Sbjct 303395 GAGTC-AGTTGCTTGGGAATGCAGCCCAAAGTGGTTGGTAAATTCCATCTAAAGCTAAAT 303453
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| || ||||| ||||| ||||||| | | |||| ||||||| |||||| |
Sbjct 303454 ACCAGCACGAGACAGATAGTTAACAAGTACCATAAGTCAAAGTTGAAAAGAACTTTGAAG 303513
Query 160 AGAGAGTTAAAAAGCACGTGAA 181
| ||| || || || |||||
Sbjct 303514 AAAGACTTCAAGAGGGTGTGAA 303535
>seq195
Length=3676426
Score = 91.5 bits (100), Expect = 6e-16
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106
|||| ||||||||||||| | || || |||||| | | ||||||| |||||| ||||
Sbjct 15806 GTTGCTTGGGAATGCAGCCCAAAGCAGGTGGTAAACTCCATCTAAAGATAAATACTGGCA 15747
Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166
| ||||| |||| |||||| | | ||||| |||||| |||||| | |||||||
Sbjct 15746 AAAGACCAATAGTCAACAAGTGCCATAAGGGAAAGTTGAAAATAACTTTGAAGAGAGAGT 15687
Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
| || || | ||||| ||| | ||| ||
Sbjct 15686 TCAAGAGGGCATGAAACCGTTAAGAGGCAA 15657
>seq845
Length=878105
Score = 87.8 bits (96), Expect = 7e-15
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||| ||||||||||||| | || |||| |||||| | | ||||| | ||| |
Sbjct 171859 GAGTTGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGATAATT 171918
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| || || |||||||| ||||||| | | ||||| ||||||| |||||| |
Sbjct 171919 ACCAGCATGAAACCGATAGTCAACAAGTACTATAAGAGAAAGTTGAAAAGAACTTTGAAG 171978
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||| | || || | |||||
Sbjct 171979 AGAGAGCTCAAGAGGGCATGAAA 172001
>seq1172
Length=354277
Score = 86.0 bits (94), Expect = 3e-14
Identities = 100/134 (75%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| ||||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 36678 GAGTC-AGTTGCTTGGGAATGCAGCCCAAAGTGGTTGGTAAACTCCATCTAAGGCTAAAT 36736
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| || ||||| |||| | ||||| | | ||||| ||||||| |||||| |
Sbjct 36737 ATCAGCACAAGACCAATAGTTAAGAAGTACCATAAGGGAAAGTTGAAAAGAACTTTGAAG 36796
Query 160 AGAGAGTTAAAAAG 173
||||| || || ||
Sbjct 36797 AGAGACTTCAAGAG 36810
>seq826
Length=936100
Score = 82.4 bits (90), Expect = 3e-13
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643
|||||||||||||| |||| ||| ||||||||||||||||| ||| | ||| ||
Sbjct 187519 TGAACTATGCCTGAGCAGGGCAAAGTCAGAGGAAACTCTGGTGCAGGTCCATAGCAGTCT 187460
Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| | ||||||||| || || | |||||||||||| ||
Sbjct 187459 TGACATGCAAATCGGTCCTCCTACCTGGGTATAGGGGTGA 187420
>seq7
Length=11971544
Score = 75.2 bits (82), Expect = 5e-11
Identities = 92/125 (74%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||| | || ||| | |||| | | ||||| |||||||
Sbjct 10454552 GAGTCGGGTTGCTTGGGAATGCATTCCAAAGTGGTTGATAAACTCCATCTAAGGCTAAAT 10454611
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| || ||||||||||| ||||| | | | ||||| ||||||| |||||| |
Sbjct 10454612 ACCAGCAGGAGACCGATAGTCAACAAGCACCATAAGGGAAAGTTGAAAAGAACTTTG--A 10454669
Query 160 AGAGA 164
|||||
Sbjct 10454670 AGAGA 10454674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079875525650
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