Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq418 179 2e-43
seq83 167 1e-39
seq115 150 8e-35
seq525 141 4e-32
seq195 140 1e-31
seq1172 122 4e-26
seq198 107 9e-22
seq1239 104 1e-20
seq1124 91.5 7e-17
seq284 82.4 4e-14
>seq418
Length=2079112
Score = 179 bits (198), Expect = 2e-43
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162400 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 1162341
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1162340 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 1162299
>seq83
Length=5509936
Score = 167 bits (184), Expect = 1e-39
Identities = 97/100 (97%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 4199636 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACTGCGAGTGAACAGGGAAGAGCCCAGCG 4199577
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100
||||||||||||||||||||||||||||||| |||||||
Sbjct 4199576 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAATTGTGGCG 4199537
>seq115
Length=4841617
Score = 150 bits (166), Expect = 8e-35
Identities = 94/101 (93%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 921253 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCAT 921312
Query 62 CGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||| ||||||||||||||||| ||| ||||| ||||
Sbjct 921313 TGAATCCCTGCCCCGCGGTGGGGCGCAGGAAATGTGACGTA 921353
>seq525
Length=1586369
Score = 141 bits (156), Expect = 4e-32
Identities = 89/95 (94%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 9 AACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCG-AATC 67
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 892912 AACTAACCAGAATTCCCTCAGTAACGGCGATTGAACAGGGAAGAGCCCAGCGCCGAAATC 892853
Query 68 CCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
| ||||||||||||||||||||| ||||||||||
Sbjct 892852 GCTGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 892818
>seq195
Length=3676426
Score = 140 bits (154), Expect = 1e-31
Identities = 91/100 (91%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62
|||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||
Sbjct 16031 AAAAGAAACTAACCAGGATTCCCTCAGTAATGGTGAGTGAACAGGGAAGAGCACAGCGCC 15972
Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||| |||| || |||||| ||||||| ||
Sbjct 15971 GAATCCCCGCCCCACGGTAGGCAGCGGGAAATGTGGCTTA 15932
>seq1172
Length=354277
Score = 122 bits (134), Expect = 4e-26
Identities = 88/102 (86%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||| ||||||||||||| || |||||| |||||||||||||||
Sbjct 318335 GGAAAAGAAACTAACCAGAATTCCCTCAGTAAAGGTTAGTGAAAAGGGAAGAGCCCAGCA 318276
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
| |||||||| ||||| |||| || | |||| ||||||| ||
Sbjct 318275 CTGAATCCCCACCCCGTGGTGAGGAGTGGGAAATGTGGCTTA 318234
Score = 107 bits (118), Expect = 9e-22
Identities = 89/110 (81%), Gaps = 8/110 (7%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||| |||||||||||||| | || ||||||||||||||||||||||
Sbjct 216548 GGAAAAGAAACTAAATAGGATTCCCTCAGTGAAGGTGAGTGAACAGGGAAGAGCCCAGAA 216489
Query 61 CC--------GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|| |||||||| |||| | ||||||| ||||| ||||||| ||
Sbjct 216488 CCCCAGAACTGAATCCCCACCCCACAGTGGGGCACGGGAAATGTGGCTTA 216439
Score = 104 bits (114), Expect = 1e-20
Identities = 89/110 (81%), Gaps = 9/110 (8%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAG------- 53
||||||||||||||| |||||||||||||||| || |||||||||||||||||
Sbjct 36449 GGAAAAGAAACTAACTAGGATTCCCTCAGTAAAGGTGAGTGAACAGGGAAGAGCCCAGAA 36508
Query 54 -CCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||| |||||||||| || |||||||||| | | | ||||||| ||
Sbjct 36509 CCCCAGAACCGAATCCCC-ACCTGCGGTGGGGCACAGAAAATGTGGCTTA 36557
>seq198
Length=3721735
Score = 107 bits (118), Expect = 9e-22
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
Sbjct 2284103 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACAACAAGTGAACAGGGAAGAGCCCAGAG 2284044
Query 61 CCGAATCCCCGCCCCGC 77
|| |||||| |||| ||
Sbjct 2284043 CCAAATCCCTGCCCAGC 2284027
>seq1239
Length=326292
Score = 104 bits (114), Expect = 1e-20
Identities = 81/97 (84%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||| ||||||||||||||||||||||||| || | ||||||| ||||||||||
Sbjct 303173 GGAAAATAAACTAACCAGGATTCCCTCAGTAAAGGTTATTGAACAGATAAGAGCCCAGAA 303232
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTG 97
|| ||||||| ||| | ||||||| || ||| |||||
Sbjct 303233 CCAAATCCCCACCCTGTGGTGGGGTGCAGGAAATGTG 303269
>seq1124
Length=357957
Score = 91.5 bits (100), Expect = 7e-17
Identities = 66/77 (86%), Gaps = 6/77 (8%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||| |||| ||||||||||||||| || ||||||||||||||||||||||
Sbjct 6462 GGAAAAGAAACTTACCACGATTCCCTCAGTAACAGCAAGTGAACAGGGAAGAGCCCAGC- 6404
Query 61 CCGAATCCCCGCCCCGC 77
|||| |||||||
Sbjct 6403 -----TCCCTGCCCCGC 6392
>seq284
Length=3309238
Score = 82.4 bits (90), Expect = 4e-14
Identities = 58/65 (89%), Gaps = 1/65 (2%)
Strand=Plus/Plus
Query 35 GCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACAT 94
|||||||||||||||||||||| ||||| ||| |||||||| |||||||||| ||| ||
Sbjct 392516 GCGAGTGAACAGGGAAGAGCCCGGCGCCAAAT-CCCGCCCCATGGTGGGGCGCAGGAAAT 392574
Query 95 GTGGC 99
|||||
Sbjct 392575 GTGGC 392579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230387465520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |