Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq826 91.5 9e-17 seq1124 71.6 8e-11 >seq826 Length=936100 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 121638 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 121581 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 121580 TAAT-CAACGCAAGCT 121566 >seq1124 Length=357957 Score = 71.6 bits (78), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 |||||||||||| ||| ||||||| || || | | | ||||||||||||||||||| | Sbjct 6928 TCACTAAGCCATCCAATT-GGTAGTA-GCTACAGTCAGTGTGTACAAAGGGCAGGGACTT 6985 Query 110 AATACAACGCAAGCT 124 ||| ||||||||||| Sbjct 6986 AAT-CAACGCAAGCT 6999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300783635540