Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq826 91.5 9e-17
seq1124 71.6 8e-11
>seq826
Length=936100
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 121638 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 121581
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 121580 TAAT-CAACGCAAGCT 121566
>seq1124
Length=357957
Score = 71.6 bits (78), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
|||||||||||| ||| ||||||| || || | | | ||||||||||||||||||| |
Sbjct 6928 TCACTAAGCCATCCAATT-GGTAGTA-GCTACAGTCAGTGTGTACAAAGGGCAGGGACTT 6985
Query 110 AATACAACGCAAGCT 124
||| |||||||||||
Sbjct 6986 AAT-CAACGCAAGCT 6999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300783635540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |