Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq788 82.4 9e-14 seq347 82.4 9e-14 seq826 77.0 4e-12 >seq788 Length=930302 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 299191 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 299249 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 299250 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 299290 >seq347 Length=2345083 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| |||| ||||||||| ||||||| ||| |||| | | || Sbjct 103984 AAACCAACAAAATAGAACCGCA-GTCCTATTCCATTATTCGTAGCTGCGGTATCCAGACG 103926 Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||| |||| ||||| Sbjct 103925 GCTTGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 103885 >seq826 Length=936100 Score = 77.0 bits (84), Expect = 4e-12 Identities = 81/102 (79%), Gaps = 5/102 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | ||| Sbjct 184465 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCAGTATCCAGGCA 184407 Query 70 --TAAG-CCTGCTTTGAACACTC-TAATTTTCTCAAGGTAAA 107 | || |||||||||||||||| ||||||| |||| ||||| Sbjct 184406 GCTCAGACCTGCTTTGAACACTCTTAATTTTTTCAAAGTAAA 184365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595166539902