Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq788 82.4 9e-14
seq347 82.4 9e-14
seq826 77.0 4e-12
>seq788
Length=930302
Score = 82.4 bits (90), Expect = 9e-14
Identities = 80/101 (79%), Gaps = 4/101 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| ||| ||||||||| |||||||| ||| |||| | ||||
Sbjct 299191 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 299249
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
|||||||||||||||||||||||| |||| |||||
Sbjct 299250 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 299290
>seq347
Length=2345083
Score = 82.4 bits (90), Expect = 9e-14
Identities = 80/101 (79%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| |||| ||||||||| ||||||| ||| |||| | | ||
Sbjct 103984 AAACCAACAAAATAGAACCGCA-GTCCTATTCCATTATTCGTAGCTGCGGTATCCAGACG 103926
Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
| |||||||||||||||||||||||| |||| |||||
Sbjct 103925 GCTTGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 103885
>seq826
Length=936100
Score = 77.0 bits (84), Expect = 4e-12
Identities = 81/102 (79%), Gaps = 5/102 (5%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||
Sbjct 184465 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCAGTATCCAGGCA 184407
Query 70 --TAAG-CCTGCTTTGAACACTC-TAATTTTCTCAAGGTAAA 107
| || |||||||||||||||| ||||||| |||| |||||
Sbjct 184406 GCTCAGACCTGCTTTGAACACTCTTAATTTTTTCAAAGTAAA 184365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595166539902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |