Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq826 161 2e-37
seq441 158 2e-36
seq338 138 2e-30
seq121 109 1e-21
seq402 105 1e-20
seq6 91.5 3e-16
seq15 86.0 1e-14
seq286 84.2 4e-14
seq883 80.6 5e-13
>seq826
Length=936100
Score = 161 bits (178), Expect = 2e-37
Identities = 195/259 (75%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | |||| || | | ||| ||||||||||||||||
Sbjct 121342 CTTCTTAGAGGGACAATTGGTGTTCAGCCACCCGA-GATGGAG-CAATAACAGGTCTGTG 121399
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||| |||||||| | ||| |||||| ||||||||| || | || | || |
Sbjct 121400 ATGCCATTAGATGTCCCAGGCTGCACGCTCGCTACACTAACTGGCTCAGCATGTGACTAC 121459
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGT-CGTGCTGGGGATAGAGCATT 249
||| || || |||| |||||| | ||| ||| || | | || ||||| ||| | |||
Sbjct 121460 CCTACGCTGGCAGGTGCGGGTAACCC-GTTGAACCCTATTCATGATGGGGGTAGGGGATT 121518
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
||||||||| | | | || ||||||| || |||||| ||| ||||| ||| ||||||||
Sbjct 121519 GCAATTATTACCCATGAATGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGAT 121578
Query 310 TACGTCCCTGCCCTTTGTA 328
|| ||||||||||||||||
Sbjct 121579 TAAGTCCCTGCCCTTTGTA 121597
Score = 107 bits (118), Expect = 4e-21
Identities = 194/274 (71%), Gaps = 20/274 (7%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||| ||| | ||| | |||| || | ||||| ||||||||||||| ||
Sbjct 185008 CTTCTTAGAGAGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTCTG 185065
Query 131 ATGCCCTTAGATGTTCTGGGCCGCAC--GCGCGCTACACTGACAG----AGCCA----AC 180
|||||||||| ||| | |||| |||| | || |||||||||| | || || ||
Sbjct 185066 ATGCCCTTAGGTGTCCCGGGCTGCACATGTGCACTACACTGACTGGATCAGTCAGTGGAC 185125
Query 181 --GA---GTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA-CTCTGTCGTGC 234
|| || | | ||| ||| || |||| || || || || || | | || ||
Sbjct 185126 TGGATCGGTGCCTACCCTAGGCTGGCAGGTGCAGGAAA-CTCATTGAATCCCATTCTTGA 185184
Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294
||||||| | | | |||||||||| ||| | ||| || ||| || |||||| || ||||
Sbjct 185185 TGGGGATTGGGGAGTGCAATTATTCCTCATGAACAAGTAATTCCCAGTAAGTGCAGGTCA 185244
Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||| || ||||||| || ||||||||||||
Sbjct 185245 TAAGCTTGCATTGATTAAATCTCTGCCCTTTGTA 185278
>seq441
Length=2030139
Score = 158 bits (174), Expect = 2e-36
Identities = 190/254 (75%), Gaps = 7/254 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 1495683 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 1495740
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || | |
Sbjct 1495741 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 1495800
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | ||||
Sbjct 1495801 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCAGGGATTG 1495860
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||| | | ||||| |||| |||
Sbjct 1495861 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGAGGGTCAT----ACGCTGACATT 1495916
Query 311 ACGTCCCTGCCCTT 324
| ||||||||||||
Sbjct 1495917 AAGTCCCTGCCCTT 1495930
Score = 114 bits (126), Expect = 2e-23
Identities = 161/224 (72%), Gaps = 9/224 (4%)
Strand=Plus/Plus
Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164
||| ||||| || |||||| |||||| ||||||||||||| | |||| |||| | | ||
Sbjct 1392740 AAGATTGAG-CAGTAACAGATCTGTGGTGCCCTTAGATGTCCGGGGCTGCACCCAC--TA 1392796
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
||||||||| || || || | | || | || |||| ||||| || | || |
Sbjct 1392797 CACTGACAGGCTCAGCGTGTGCCTACTCTACACTGGCAGGTGCTGGTAACCTGTTGAACC 1392856
Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284
| | ||| ||||| ||| |||||||| | | | || ||||||| || |||||
Sbjct 1392857 CCATTTGTGATGGGGG------ATTACAATTATTCCCCATGAATGAGGAATTCCCAGTAA 1392910
Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| | | ||||| ||| | |||||||| ||||||||||||||||
Sbjct 1392911 GTGTGGGTCATAAGCGTGTGTTGATTAAGTCCCTGCCCTTTGTA 1392954
>seq338
Length=2461381
Score = 138 bits (152), Expect = 2e-30
Identities = 160/214 (75%), Gaps = 9/214 (4%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct 2400710 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 2400652
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
|||||| | || || || | | ||| ||| | ||| |||||| || | || |
Sbjct 2400651 ACTGACTGGCTCAGCGTGTGCCTACCCTACGCCAGCAGGCGCGGGTAACCTGTTGAACCC 2400592
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| ||||| ||||| |||||||||||| | | | ||||||||| || ||||||
Sbjct 2400591 CATTCGTGATGGGG-------ATTGCAATTATTCCCCATGGACGAGGAATTCCCAGTAAG 2400539
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
| | |||| ||| || ||||||| |||||||
Sbjct 2400538 TGAGGATCATAAGCTTGCATTGATTA-GTCCCTG 2400506
>seq121
Length=4977944
Score = 109 bits (120), Expect = 1e-21
Identities = 182/258 (71%), Gaps = 5/258 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | || | |||| | || ||||| ||||| ||||||||||
Sbjct 1925404 CTTCTTAGAGGGACAACTAGCATTCAGCCACCG--AGATTGAG-CAATAGCAGGTCTGTG 1925348
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||| ||| | | || ||| || ||||||||||| | || || | |
Sbjct 1925347 ATGCCCTTAGGTGT-CGGCGCTGCATGCATGCTACACTGACTGGCTCAGTGATTGCCAAC 1925289
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| || | |||| || || || || | | ||||| | ||||| | ||||
Sbjct 1925288 CCTACACCAGCAGGTGCGGATAGTCCGTGGAACCCCATTCGTGATAGGGATCAGGGATTG 1925229
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | | | |||||| || |||||| | | ||||| ||| | |||||||
Sbjct 1925228 CAATTATTACCCATGAGCAAGGAATTCCCAGTAAGTGTGGGTCATAAGCTTGAGTTGATT 1925169
Query 311 ACGTCCCTGCCCTTTGTA 328
| |||||||||||| |||
Sbjct 1925168 AAGTCCCTGCCCTTAGTA 1925151
>seq402
Length=2174813
Score = 105 bits (116), Expect = 1e-20
Identities = 117/151 (77%), Gaps = 4/151 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 1558748 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 1558805
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || | |
Sbjct 1558806 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 1558865
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTA 221
||| ||||| ||| |||||| || ||||
Sbjct 1558866 CCTACGCCGGCAGGCGCGGGTAA-CTAGTTA 1558895
>seq6
Length=12956524
Score = 91.5 bits (100), Expect = 3e-16
Identities = 78/95 (82%), Gaps = 1/95 (1%)
Strand=Plus/Plus
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| ||||||| | | |||||||||||| | | | |||||||||| || |||||| ||
Sbjct 419833 TCGTGATGGGGATGGGG-ATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGC 419891
Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCT 323
| ||||| ||| || ||||||| |||||||||||
Sbjct 419892 GAGTCATAAGCTTGCTTTGATTAAGTCCCTGCCCT 419926
>seq15
Length=10322312
Score = 86.0 bits (94), Expect = 1e-14
Identities = 158/228 (69%), Gaps = 14/228 (6%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| | ||| ||||| ||||||||||||||||
Sbjct 7250287 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACTC-AAGATTGAG-CAATAACAGGTCTGTG 7250344
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||||| || ||| ||| ||||||| | || || || | |
Sbjct 7250345 ATGCCCTTAGATG-TCAGGG----------GCTGCACTGACTGGCTCAGCGTGTGCCTAC 7250393
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| | || ||| ||||| | | || | | | ||| | ||||| | | ||||
Sbjct 7250394 CCTACGAAGGCAGGCGCAGGTAACCCGTTGAACCCCATTTGTGATAGGGATTGGGGATTG 7250453
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAG 298
|||||||| | | | ||| | |||| || |||||| ||| ||||| ||
Sbjct 7250454 CAATTATTCCCCATGAACAAAGAATTCCCAGTAAGTGCGGGTCATAAG 7250501
>seq286
Length=2937124
Score = 84.2 bits (92), Expect = 4e-14
Identities = 59/66 (89%), Gaps = 1/66 (2%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| | |||| |||| | ||||||
Sbjct 1304120 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACACACGCTAC 1304062
Query 166 ACTGAC 171
||||||
Sbjct 1304061 ACTGAC 1304056
>seq883
Length=813231
Score = 80.6 bits (88), Expect = 5e-13
Identities = 57/64 (89%), Gaps = 1/64 (2%)
Strand=Plus/Plus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| | |||| ||| |||| ||||
Sbjct 92947 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCATGCGCTCTAC 93005
Query 166 ACTG 169
||||
Sbjct 93006 ACTG 93009
Score = 75.2 bits (82), Expect = 2e-11
Identities = 57/66 (86%), Gaps = 1/66 (2%)
Strand=Plus/Plus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| | |||| | || |||||||
Sbjct 92819 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCAGGGCTGAACATGCGCTAC 92877
Query 166 ACTGAC 171
| ||||
Sbjct 92878 AGTGAC 92883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947145033984
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