Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19] 5,803 sequences; 2,715,720,925 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq24 428 1e-117 seq2 396 9e-108 seq1124 372 1e-100 seq45 192 2e-46 seq377 167 8e-39 seq65 140 1e-30 seq51 118 3e-24 seq387 104 8e-20 seq547 98.7 3e-18 seq1357 84.2 7e-14 seq254 82.4 2e-13 seq442 80.6 9e-13 >seq24 Length=8999101 Score = 428 bits (474), Expect = 1e-117 Identities = 273/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||| ||||| Sbjct 7107037 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAACTCAA 7107096 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| || || Sbjct 7107097 CAGAGTCTTCTTTCCCTGCTGATTCCGCCAAGCCTGTTCCCTTGGCTGTGGTTTTGCCAG 7107156 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || |||||||||| || ||||||||||||||| Sbjct 7107157 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATACGTGTCACTAATTAGATG 7107216 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 7107217 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACCGTTTACCCACGCTTCA 7107276 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 7107277 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 7107333 >seq2 Length=16010500 Score = 396 bits (438), Expect = 9e-108 Identities = 266/297 (90%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| |||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 2530074 CTCCCATTTATTCTACACCTCTCCTGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAA 2530015 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||| |||| ||||| || ||||||||| ||||| |||||||||||||| | | Sbjct 2530014 CAGGGTCTTCTCTCCCTGCTGACTCTGCCAAGCCCATTCCCCTGGCTGTGGTTTCGTTGG 2529955 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2529954 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 2529895 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||| |||||| || ||||||| |||||| Sbjct 2529894 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAATTACTCGTGCTGTTTACCTGCGCTTCA 2529835 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2529834 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACGGCACGTCAACA 2529778 >seq1124 Length=357957 Score = 372 bits (412), Expect = 1e-100 Identities = 263/298 (88%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| ||| || ||||| ||| ||||| | | | |||||||||||||||||| Sbjct 4472 CTCCCACTTATCCTATACTTCTCATGTCTCTTCACCATGCCAGACTAGAGTCAAGCTCAA 4531 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| |||||||| ||||||| ||||||| | || |||||||||||| Sbjct 4532 TAGGGTCTTCTTTCCCCACTGATTCCACCAAGCCAGTTCCCT-GACTATGGTTTCGCTAG 4590 Query 357 -ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 ||||||| ||||||||||||||||||| || |||||| ||| | ||||||||||||| Sbjct 4591 GATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATCCATAAACATCACTAATTAGAT 4650 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 || ||||||||||| |||||||||||||||||||||||||| ||| |||||||| | || Sbjct 4651 GATGAGGCATTTGGATACCTTAAGAGAGTCATAGTTACTCCTGCCATTTACCCGTGTTTC 4710 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 4711 ATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATAACATTGCGTCAACA 4768 >seq45 Length=6757098 Score = 192 bits (212), Expect = 2e-46 Identities = 199/257 (77%), Gaps = 28/257 (11%) Strand=Plus/Plus Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC--------GTTCC 336 |||| ||| || |||||||||||| |||||||||||||||||||||| ||||| Sbjct 4618727 AGTCGAGCCCAGCAGGGTCTTCTT-CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGTTCC 4618785 Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396 ||||||||||||| |||| |||||||| | | ||| |||||||| ||| | |||||| Sbjct 4618786 CTTGGCTGTGGTTCCGCTGGATAGTAG-TCTGTGCAGCGGGAATCTAGTTCAGCCATTCC 4618844 Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 ||||| |||||||| | | |||||| |||| |||||| |||||||| Sbjct 4618845 TGCGC------------ATGACGAGACCTCTGGCTAGCTTA--AGAGTCGGGGTTACTCC 4618890 Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516 | | |||||||| | | ||||||||||||||||| |||||| ||||||||||||| Sbjct 4618891 C-CAGTTTACCC-CAGGTCATTGAATTTCTTCACTTTCACATTC--AGCACTGGGCAGAG 4618946 Query 517 ATCACATTGCGTCAACA 533 ||||||| ||||||||| Sbjct 4618947 ATCACATGGCGTCAACA 4618963 >seq377 Length=2355257 Score = 167 bits (184), Expect = 8e-39 Identities = 135/165 (82%), Gaps = 9/165 (5%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||| |||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 2146395 GACTAGAGTCAAACTCAACAGGGTCTTCTTTCCCCAATGATTCCGCTGAGCCCATTCCCT 2146336 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||| || || || ||| |||||| ||||||||||| ||| ||||||||||| Sbjct 2146335 TGGCAGT---------AGCTAATAGGTAGGGAGAGTGGGAATCTTGTTCATCCATTCATG 2146285 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443 | |||||||||| |||||| |||||| ||||||| ||||||| Sbjct 2146284 TGTGTCACTAATTTGATGACTGTGCATTTAGCTACCTGAAGAGAG 2146240 >seq65 Length=6435606 Score = 140 bits (154), Expect = 1e-30 Identities = 100/115 (87%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||| ||||||||||| ||||| ||||| | ||||| | |||| || Sbjct 203062 GAGGCATTTGGCTAACTTAAGAGAGTTATAGTAACTCCTACAGTTTAATTGTGCTTCATT 203121 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||| ||||||||| || |||||| Sbjct 203122 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAAAAATCACATCGCATCAACA 203176 >seq51 Length=7059049 Score = 118 bits (130), Expect = 3e-24 Identities = 77/85 (91%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | | ||||| |||||||||||| Sbjct 3257318 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCATGCCAGACTACAGTCAAGCTCAA 3257377 Query 297 CAGGGTCTTCTTTCCCCGCTGATTC 321 ||||||||||||||||||||||||| Sbjct 3257378 CAGGGTCTTCTTTCCCCGCTGATTC 3257402 >seq387 Length=2370406 Score = 104 bits (114), Expect = 8e-20 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || || |||| ||||||| |||| |||| | |||||||||| |||| ||| Sbjct 1207808 CTTCTGTTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACAACTGCATTACT 1207749 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 1207748 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 1207702 >seq547 Length=1705473 Score = 98.7 bits (108), Expect = 3e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| ||| |||| | ||||||||||||||| ||| Sbjct 504 CTTCTGCTCCACGGGAGGTTTCTGTCTTCCCTGAGCTCGCCTTAGGACACCTGCATTACT 445 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| || |||||| ||||||||||||||| || |||| Sbjct 444 ATTTGACAGGTGTACCACCCCAGTCAAACTCCCCACCTGGCACTGTC 398 >seq1357 Length=230225 Score = 84.2 bits (92), Expect = 7e-14 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 13 CTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAA 72 ||| || | || ||||||| |||| |||| | ||||||||||||||||| ||| | Sbjct 207602 CTCCACGGAAGGTTTCTGTCCTCCCTGAGCTTGCTTTAGGACACCTGCGTTACCATTTGA 207661 Query 73 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| ||| || ||||| ||||||||||||||| || |||| Sbjct 207662 CAGGTGTACCACCCCAATCAAACTCCCCACCTGGCACTGTC 207702 >seq254 Length=3264618 Score = 82.4 bits (90), Expect = 2e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| ||||||||||||||| ||| Sbjct 1800705 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCATTACC 1800764 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATG 111 ||| |||| | | || ||| || ||||||||||||||| || || Sbjct 1800765 ATTTGACAGGTATACCACCCTAGTCAAACTCCCCACCTGGCACTG 1800809 >seq442 Length=2055734 Score = 80.6 bits (88), Expect = 9e-13 Identities = 78/96 (81%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCA-AGCTCA 295 |||||||||| ||||||||||||| |||| ||||| || || | | || | |||| Sbjct 712978 CTCCCACTTAGTCTACACCTCTCATGTCACTTCACCT--TC--ACC-GTGCCAGAACTCA 712924 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331 ||||||||||||||||| ||||||||| ||||||| Sbjct 712923 ACAGGGTCTTCTTTCCCTGCTGATTCCATCAAGCCC 712888 Score = 78.8 bits (86), Expect = 3e-12 Identities = 79/103 (77%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||| ||||| | |||| | ||||| |||| |||| ||| || ||| ||| |||| Sbjct 713288 TCTTCTGCTCCATGGGAGGTGTCTGTCCTCCCTGAGCTGGCCTCAGTACATCTGTGTTAC 713229 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 |||| |||| ||| |||||| || ||||||||||||||| || Sbjct 713228 CGTTTGACAGGTGTACCGCCCAAGTCAAACTCCCCACCTGGCA 713186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635105109344