Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Erinaceus_20europaeus_20[refseq_20GCF_5F000296755.1_202012-09-19]
5,803 sequences; 2,715,720,925 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq24 428 1e-117
seq2 396 9e-108
seq1124 372 1e-100
seq45 192 2e-46
seq377 167 8e-39
seq65 140 1e-30
seq51 118 3e-24
seq387 104 8e-20
seq547 98.7 3e-18
seq1357 84.2 7e-14
seq254 82.4 2e-13
seq442 80.6 9e-13
>seq24
Length=8999101
Score = 428 bits (474), Expect = 1e-117
Identities = 273/297 (92%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | |||||||||||| |||||
Sbjct 7107037 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAACTCAA 7107096
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||
Sbjct 7107097 CAGAGTCTTCTTTCCCTGCTGATTCCGCCAAGCCTGTTCCCTTGGCTGTGGTTTTGCCAG 7107156
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||||||||||||||||| || |||||||||| || |||||||||||||||
Sbjct 7107157 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATACGTGTCACTAATTAGATG 7107216
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 7107217 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACCGTTTACCCACGCTTCA 7107276
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 7107277 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 7107333
>seq2
Length=16010500
Score = 396 bits (438), Expect = 9e-108
Identities = 266/297 (90%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||| |||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 2530074 CTCCCATTTATTCTACACCTCTCCTGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAA 2530015
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||| |||| ||||| || ||||||||| ||||| |||||||||||||| | |
Sbjct 2530014 CAGGGTCTTCTCTCCCTGCTGACTCTGCCAAGCCCATTCCCCTGGCTGTGGTTTCGTTGG 2529955
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2529954 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 2529895
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
|||||||||||||||||||||||||||||||| |||||| || ||||||| ||||||
Sbjct 2529894 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAATTACTCGTGCTGTTTACCTGCGCTTCA 2529835
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2529834 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACGGCACGTCAACA 2529778
>seq1124
Length=357957
Score = 372 bits (412), Expect = 1e-100
Identities = 263/298 (88%), Gaps = 2/298 (1%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||| ||| || ||||| ||| ||||| | | | ||||||||||||||||||
Sbjct 4472 CTCCCACTTATCCTATACTTCTCATGTCTCTTCACCATGCCAGACTAGAGTCAAGCTCAA 4531
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||| |||||||| ||||||| ||||||| | || ||||||||||||
Sbjct 4532 TAGGGTCTTCTTTCCCCACTGATTCCACCAAGCCAGTTCCCT-GACTATGGTTTCGCTAG 4590
Query 357 -ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
||||||| ||||||||||||||||||| || |||||| ||| | |||||||||||||
Sbjct 4591 GATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATCCATAAACATCACTAATTAGAT 4650
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475
|| ||||||||||| |||||||||||||||||||||||||| ||| |||||||| | ||
Sbjct 4651 GATGAGGCATTTGGATACCTTAAGAGAGTCATAGTTACTCCTGCCATTTACCCGTGTTTC 4710
Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 4711 ATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATAACATTGCGTCAACA 4768
>seq45
Length=6757098
Score = 192 bits (212), Expect = 2e-46
Identities = 199/257 (77%), Gaps = 28/257 (11%)
Strand=Plus/Plus
Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC--------GTTCC 336
|||| ||| || |||||||||||| |||||||||||||||||||||| |||||
Sbjct 4618727 AGTCGAGCCCAGCAGGGTCTTCTT-CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGTTCC 4618785
Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA 396
||||||||||||| |||| |||||||| | | ||| |||||||| ||| | ||||||
Sbjct 4618786 CTTGGCTGTGGTTCCGCTGGATAGTAG-TCTGTGCAGCGGGAATCTAGTTCAGCCATTCC 4618844
Query 397 TGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
||||| |||||||| | | |||||| |||| |||||| ||||||||
Sbjct 4618845 TGCGC------------ATGACGAGACCTCTGGCTAGCTTA--AGAGTCGGGGTTACTCC 4618890
Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516
| | |||||||| | | ||||||||||||||||| |||||| |||||||||||||
Sbjct 4618891 C-CAGTTTACCC-CAGGTCATTGAATTTCTTCACTTTCACATTC--AGCACTGGGCAGAG 4618946
Query 517 ATCACATTGCGTCAACA 533
||||||| |||||||||
Sbjct 4618947 ATCACATGGCGTCAACA 4618963
>seq377
Length=2355257
Score = 167 bits (184), Expect = 8e-39
Identities = 135/165 (82%), Gaps = 9/165 (5%)
Strand=Plus/Minus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
|||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct 2146395 GACTAGAGTCAAACTCAACAGGGTCTTCTTTCCCCAATGATTCCGCTGAGCCCATTCCCT 2146336
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
|||| || || || ||| |||||| ||||||||||| ||| |||||||||||
Sbjct 2146335 TGGCAGT---------AGCTAATAGGTAGGGAGAGTGGGAATCTTGTTCATCCATTCATG 2146285
Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443
| |||||||||| |||||| |||||| ||||||| |||||||
Sbjct 2146284 TGTGTCACTAATTTGATGACTGTGCATTTAGCTACCTGAAGAGAG 2146240
>seq65
Length=6435606
Score = 140 bits (154), Expect = 1e-30
Identities = 100/115 (87%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
|||||||||||||| ||||||||||| ||||| ||||| | ||||| | |||| ||
Sbjct 203062 GAGGCATTTGGCTAACTTAAGAGAGTTATAGTAACTCCTACAGTTTAATTGTGCTTCATT 203121
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||| ||||||||| || ||||||
Sbjct 203122 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAAAAATCACATCGCATCAACA 203176
>seq51
Length=7059049
Score = 118 bits (130), Expect = 3e-24
Identities = 77/85 (91%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | | ||||| ||||||||||||
Sbjct 3257318 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCATGCCAGACTACAGTCAAGCTCAA 3257377
Query 297 CAGGGTCTTCTTTCCCCGCTGATTC 321
|||||||||||||||||||||||||
Sbjct 3257378 CAGGGTCTTCTTTCCCCGCTGATTC 3257402
>seq387
Length=2370406
Score = 104 bits (114), Expect = 8e-20
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || || |||| ||||||| |||| |||| | |||||||||| |||| |||
Sbjct 1207808 CTTCTGTTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACAACTGCATTACT 1207749
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||||||| ||||||||||||||| || ||||
Sbjct 1207748 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 1207702
>seq547
Length=1705473
Score = 98.7 bits (108), Expect = 3e-18
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| ||| |||| | ||||||||||||||| |||
Sbjct 504 CTTCTGCTCCACGGGAGGTTTCTGTCTTCCCTGAGCTCGCCTTAGGACACCTGCATTACT 445
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| || |||||| ||||||||||||||| || ||||
Sbjct 444 ATTTGACAGGTGTACCACCCCAGTCAAACTCCCCACCTGGCACTGTC 398
>seq1357
Length=230225
Score = 84.2 bits (92), Expect = 7e-14
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 13 CTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAA 72
||| || | || ||||||| |||| |||| | ||||||||||||||||| ||| |
Sbjct 207602 CTCCACGGAAGGTTTCTGTCCTCCCTGAGCTTGCTTTAGGACACCTGCGTTACCATTTGA 207661
Query 73 CAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| ||| || ||||| ||||||||||||||| || ||||
Sbjct 207662 CAGGTGTACCACCCCAATCAAACTCCCCACCTGGCACTGTC 207702
>seq254
Length=3264618
Score = 82.4 bits (90), Expect = 2e-13
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | |||| ||||||| |||| |||| ||||||||||||||| |||
Sbjct 1800705 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCATTACC 1800764
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATG 111
||| |||| | | || ||| || ||||||||||||||| || ||
Sbjct 1800765 ATTTGACAGGTATACCACCCTAGTCAAACTCCCCACCTGGCACTG 1800809
>seq442
Length=2055734
Score = 80.6 bits (88), Expect = 9e-13
Identities = 78/96 (81%), Gaps = 6/96 (6%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCA-AGCTCA 295
|||||||||| ||||||||||||| |||| ||||| || || | | || | ||||
Sbjct 712978 CTCCCACTTAGTCTACACCTCTCATGTCACTTCACCT--TC--ACC-GTGCCAGAACTCA 712924
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331
||||||||||||||||| ||||||||| |||||||
Sbjct 712923 ACAGGGTCTTCTTTCCCTGCTGATTCCATCAAGCCC 712888
Score = 78.8 bits (86), Expect = 3e-12
Identities = 79/103 (77%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
|||| ||||| | |||| | ||||| |||| |||| ||| || ||| ||| ||||
Sbjct 713288 TCTTCTGCTCCATGGGAGGTGTCTGTCCTCCCTGAGCTGGCCTCAGTACATCTGTGTTAC 713229
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108
|||| |||| ||| |||||| || ||||||||||||||| ||
Sbjct 713228 CGTTTGACAGGTGTACCGCCCAAGTCAAACTCCCCACCTGGCA 713186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635105109344
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