Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5846 134 3e-29 seq2190 77.0 6e-12 >seq5846 Length=143565 Score = 134 bits (148), Expect = 3e-29 Identities = 184/251 (73%), Gaps = 11/251 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG-CCTTTGCTC--GAATACATTAGCAT 130 |||||||||||||| ||||||||||||||||||| || ||| | |||| ||| Sbjct 110381 TTTACTTTGAAAAAGTTAGAGTGTTCAAAGCAGGCCCGAACCTCCTGGATACCACAGCTA 110440 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||||| || |||||| | | |||| ||||||||||||| | || | | ||||| Sbjct 110441 GGAATAATGGAGTAGGACCT-CAGTTCCATTTTGTTGGTTTTCATAACTGAGGCCATGAT 110499 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATT---CAATTGTCAGAGGTGAAATTCTTGGATT 247 ||| ||||| || | |||| | ||||| | | | |||||||||||||||||| Sbjct 110500 TAAGAGGGACAGCCAGGGGCATTTGTATTGCGCCACT---AGAGGTGAAATTCTTGGACC 110556 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||| || | |||||||| || ||||| ||||||||||||||| | |||| Sbjct 110557 AGCGCAAGATGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATC-GAGAACA 110615 Query 308 AAAGTTAGGGG 318 ||||| || || Sbjct 110616 AAAGTCAGAGG 110626 >seq2190 Length=274377 Score = 77.0 bits (84), Expect = 6e-12 Identities = 61/72 (85%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| |||||| | | |||||||||||||||||||||||| Sbjct 31586 ATGCTCTTAGCTGAGTGTCCCGCGGAGCCCAAAGCGTTTACTTTGAAAAAATTAGAGTGT 31527 Query 98 TCAAAGCAGGCC 109 |||||||||||| Sbjct 31526 TCAAAGCAGGCC 31515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914676478144