Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq5846 134 3e-29
seq2190 77.0 6e-12
>seq5846
Length=143565
Score = 134 bits (148), Expect = 3e-29
Identities = 184/251 (73%), Gaps = 11/251 (4%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG-CCTTTGCTC--GAATACATTAGCAT 130
|||||||||||||| ||||||||||||||||||| || ||| | |||| |||
Sbjct 110381 TTTACTTTGAAAAAGTTAGAGTGTTCAAAGCAGGCCCGAACCTCCTGGATACCACAGCTA 110440
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|||||||| || |||||| | | |||| ||||||||||||| | || | | |||||
Sbjct 110441 GGAATAATGGAGTAGGACCT-CAGTTCCATTTTGTTGGTTTTCATAACTGAGGCCATGAT 110499
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATT---CAATTGTCAGAGGTGAAATTCTTGGATT 247
||| ||||| || | |||| | ||||| | | | ||||||||||||||||||
Sbjct 110500 TAAGAGGGACAGCCAGGGGCATTTGTATTGCGCCACT---AGAGGTGAAATTCTTGGACC 110556
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
|||| || | |||||||| || ||||| ||||||||||||||| | ||||
Sbjct 110557 AGCGCAAGATGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATC-GAGAACA 110615
Query 308 AAAGTTAGGGG 318
||||| || ||
Sbjct 110616 AAAGTCAGAGG 110626
>seq2190
Length=274377
Score = 77.0 bits (84), Expect = 6e-12
Identities = 61/72 (85%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| |||||| | | ||||||||||||||||||||||||
Sbjct 31586 ATGCTCTTAGCTGAGTGTCCCGCGGAGCCCAAAGCGTTTACTTTGAAAAAATTAGAGTGT 31527
Query 98 TCAAAGCAGGCC 109
||||||||||||
Sbjct 31526 TCAAAGCAGGCC 31515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914676478144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |