Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5846 145 3e-32 seq10572 89.7 2e-15 >seq5846 Length=143565 Score = 145 bits (160), Expect = 3e-32 Identities = 113/135 (84%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | ||||| | |||| |||||| |||||||| |||||||||||| |||| |||| Sbjct 115401 GAGCATGAGCACACGTGTTAGGACCCAAAAGATGGCGAACTATGCCTGGGCAGGGCGAAG 115460 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 |||||||||||||||||||||| || |||||| || ||||||||||| ||||| || Sbjct 115461 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTCACGTGCAAATCGGTCGTCCAACC 115520 Query 669 TGGGTATAGGGGCGA 683 ||||||||||||||| Sbjct 115521 TGGGTATAGGGGCGA 115535 Score = 82.4 bits (90), Expect = 3e-13 Identities = 110/153 (72%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 48 TTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA----TTG 103 ||| ||||||||||||| | | ||| |||||| | | | |||||||||||| | Sbjct 114367 TTGCTTGGGAATGCAGCCCAGAGCGGGTGGTAAACTCCATTTAAAGCTAAATACCAGCTC 114426 Query 104 GCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAG 163 | |||||| |||| ||||||| || | ||||| ||||||| |||||| | |||| Sbjct 114427 GAGCGAGACCCATAGTCAACAAGTATTGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAG 114486 Query 164 AGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||| || | |||||| |||| | ||| || Sbjct 114487 AGTTCAACAAGGTGTGAAACTGTTAAGAGGTAA 114519 >seq10572 Length=81896 Score = 89.7 bits (98), Expect = 2e-15 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 19104 GACCCAAAAGATGGTGAACTATGCCTGGGCAGGATGAAGCCAGAGGAAACTCTGGTGGAG 19163 Query 630 GCTCGCAGCGGT 641 | || ||| || Sbjct 19164 GTCCGTAGCAGT 19175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078772995650