Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq5846 145 3e-32
seq10572 89.7 2e-15
>seq5846
Length=143565
Score = 145 bits (160), Expect = 3e-32
Identities = 113/135 (84%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | ||||| | |||| |||||| |||||||| |||||||||||| |||| ||||
Sbjct 115401 GAGCATGAGCACACGTGTTAGGACCCAAAAGATGGCGAACTATGCCTGGGCAGGGCGAAG 115460
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || |||||| || ||||||||||| ||||| ||
Sbjct 115461 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTCACGTGCAAATCGGTCGTCCAACC 115520
Query 669 TGGGTATAGGGGCGA 683
|||||||||||||||
Sbjct 115521 TGGGTATAGGGGCGA 115535
Score = 82.4 bits (90), Expect = 3e-13
Identities = 110/153 (72%), Gaps = 4/153 (3%)
Strand=Plus/Plus
Query 48 TTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA----TTG 103
||| ||||||||||||| | | ||| |||||| | | | |||||||||||| |
Sbjct 114367 TTGCTTGGGAATGCAGCCCAGAGCGGGTGGTAAACTCCATTTAAAGCTAAATACCAGCTC 114426
Query 104 GCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAG 163
| |||||| |||| ||||||| || | ||||| ||||||| |||||| | ||||
Sbjct 114427 GAGCGAGACCCATAGTCAACAAGTATTGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAG 114486
Query 164 AGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
|||| || | |||||| |||| | ||| ||
Sbjct 114487 AGTTCAACAAGGTGTGAAACTGTTAAGAGGTAA 114519
>seq10572
Length=81896
Score = 89.7 bits (98), Expect = 2e-15
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 19104 GACCCAAAAGATGGTGAACTATGCCTGGGCAGGATGAAGCCAGAGGAAACTCTGGTGGAG 19163
Query 630 GCTCGCAGCGGT 641
| || ||| ||
Sbjct 19164 GTCCGTAGCAGT 19175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078772995650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |