Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq5846 134 6e-30
seq1418 96.9 2e-18
>seq5846
Length=143565
Score = 134 bits (148), Expect = 6e-30
Identities = 89/99 (90%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||
Sbjct 114148 GGAAAAGAAACTAACCAGGATTCCCTAAGTAACAGCGAGTGAACAGGGAAAAGCCCAGCG 114207
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99
| |||||| ||||| | |||||||||||| |||||||
Sbjct 114208 CTAAATCCCTGCCCCATGCTGGGGCGCGGGAAATGTGGC 114246
>seq1418
Length=341793
Score = 96.9 bits (106), Expect = 2e-18
Identities = 84/102 (82%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||| ||||||||||| ||| | |||||| ||||||||||| |
Sbjct 327818 GGAAAAGAAACTAACAAGGAATCCCTCAGTAATGGCCA-TGAACAATGAAGAGCCCAGGG 327760
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|| | |||| ||||| |||| ||||| || ||||||| ||
Sbjct 327759 CCAAGTCCCAGCCCCACGGT-GGGCGTCTGAAATGTGGCATA 327719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230276441520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |