Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq30186 77.0 2e-12 seq5846 73.4 2e-11 >seq30186 Length=3415 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| ||| | ||||| |||| |||||| ||||||||||||||||||| Sbjct 1466 CTCACTAAACCATCCAATT-GATAGTA-GCGAAGGGCGGTGTGTACAAAGGGCAGGGACT 1409 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1408 TAAT-CAACGCAAGCT 1394 >seq5846 Length=143565 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || || |||||| ||||| ||||| ||||||||||||||||||| Sbjct 111309 CTCACTAAACCATC-CAATCAGTAGTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACT 111252 Query 109 TAATACAACGCAAGCT 124 |||| || ||||||| Sbjct 111251 TAAT-CAGTGCAAGCT 111237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300638687540