Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3255 389 1e-105 seq7012 313 8e-83 seq875 197 5e-48 seq10005 147 7e-33 seq50 131 5e-28 seq487 109 2e-21 seq5773 107 6e-21 seq14249 102 3e-19 seq6871 102 3e-19 seq106 95.1 4e-17 seq7971 80.6 9e-13 seq33370 75.2 4e-11 >seq3255 Length=215076 Score = 389 bits (430), Expect = 1e-105 Identities = 265/297 (89%), Gaps = 1/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||| |||||| || ||||| | | | ||||||||| |||||||| Sbjct 147318 CTCCCACTTATTCTACATCTCTCAT-TCTCTTCACCATGCCAGACTAGAGTTAAGCTCAA 147376 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||| || |||||||||||||||| ||||||||||||||| ||||||| | Sbjct 147377 CAGGGTCTTCTTTCTCCTCTGATTCCGCCAAGCCTGTTCCCTTGGCTGTGTTTTCGCTGG 147436 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||| |||||||||||||| || ||||||||||| || ||||||||||||| Sbjct 147437 ATAGTAGGTAGGAACAGTGGGAATCTCATTCATCCATTCATGTGCACCACTAATTAGATG 147496 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||| ||||| |||||| |||||||||||||||||||| ||| ||||||| |||| Sbjct 147497 ACGAGGTATTTGACTACCTGAAGAGAGTCATAGTTACTCCTGCCATTTACCCAAGCTTCA 147556 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 147557 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 147613 Score = 86.0 bits (94), Expect = 2e-14 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||| || ||||||| |||| ||| ||||||||||||||| | ||| Sbjct 147018 CTTCTGCTCCACAAGAAGTTTCTGTCCTCCCTGAACTCCCCTTAGGACACCTACATTACC 147077 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| || |||| | |||||||||||||| || |||| Sbjct 147078 ATTTGACAGGTGTACCACCCCTGTCAAACTCCCCACCTTGCACTGTC 147124 >seq7012 Length=123366 Score = 313 bits (346), Expect = 8e-83 Identities = 248/297 (84%), Gaps = 3/297 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||| |||| |||||| | | ||||||||| |||||||| Sbjct 76315 CTCCCACTTAT---ACACCTCTTGAGTCTTTTCACTGTGCCAGACTAGAGTGAAGCTCAA 76371 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 | ||| || ||||||| ||||||| ||||| || || ||||||||||||||| ||| | Sbjct 76372 CGGGGACTCATTTCCCCACTGATTCTGCCAAACCTCTTTCCTTGGCTGTGGTTTTGCTGG 76431 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || |||||||||||| ||| ||||||||||| Sbjct 76432 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCATGTCCCTAATTAGATG 76491 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || | |||||||||||| ||||||||||| |||||||| || || |||| | | |||| Sbjct 76492 ACAAAGCATTTGGCTACTTTAAGAGAGTCTTAGTTACTTCCACCATTTATCAGAGCTTCA 76551 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| ||||||||||||||||||||| | |||| || || ||||||||||| |||||| Sbjct 76552 TTGGATTTCTTCACTTTGACATTCACAACACTAGGTAGCAATCACATTGCATCAACA 76608 >seq875 Length=424381 Score = 197 bits (218), Expect = 5e-48 Identities = 219/287 (76%), Gaps = 5/287 (2%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCA 295 |||||||||| ||| |||||| || ||||| | | | || || ||||| | ||| Sbjct 132500 CTCCCACTTAATCTTCACCTCCTGTCTCTCTTCACCATGCCAGGTTTACAGTCAGGTTCA 132559 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 |||| |||||||| || | |||| ||||| || | || ||||||| ||||| | | Sbjct 132560 ACAG--TCTTCTTTGGCCACAGATTTTGCCAAACCA-TCCCTTTGGCTGCAGTTTCACCA 132616 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||| ||| || || ||| |||| || || |||||||||||| || |||||||||| Sbjct 132617 GATAATAGGTAAAGAGAGTAGGAACATCATTCATCCATTCATGCATATCCCTAATTAGAT 132676 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GCCGTTTACCCGCGCTT 474 | ||||||||||||||||||||||||||||||||||| ||| | |||||| | || | Sbjct 132677 GGTGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACACCCATCAATTTACCTGAGCCT 132736 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 ||||||||| || |||| |||||| ||| ||||||| ||||||| Sbjct 132737 CACTGAATTTCTCCATTTTGCCATTCAAAGCCCTGGGCAAAAATCAC 132783 >seq10005 Length=87492 Score = 147 bits (162), Expect = 7e-33 Identities = 116/140 (83%), Gaps = 8/140 (6%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||| |||||| |||| | | ||||| |||||||||||| Sbjct 68231 CTCCCACTTATTCT--------CAAGTCTCTTCATCGCGCCAGACTAAAGTCAAGCTCAA 68282 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||| || ||||||||||||||| |||||||||||||||| ||||| || | Sbjct 68283 CAGGGTCTTCTTTTCCTGCTGATTCCGCCAAGTCCGTTCCCTTGGCTGTTGTTTCACTGG 68342 Query 357 ATAGTAGATAGGGACAGTGG 376 ||||||||||||||||||| Sbjct 68343 GTAGTAGATAGGGACAGTGG 68362 Score = 78.8 bits (86), Expect = 3e-12 Identities = 76/96 (79%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||| |||| || | ||||||| |||| |||| || ||||||||||||||| ||| Sbjct 67938 CTTCTGCCCTACGGGGG-TTTCTGTCCTCCCTGAGCCCGCCTTAGGACACCTGCATTACC 67996 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102 ||| |||| ||| ||||| ||||||||||||| Sbjct 67997 ATTTGACAGGTGTACCGCC----CCAAACTCCCCAC 68028 >seq50 Length=1153066 Score = 131 bits (144), Expect = 5e-28 Identities = 180/250 (72%), Gaps = 19/250 (8%) Strand=Plus/Minus Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT--CCCTTGG 341 |||||| ||| |||| |||| || || | |||||| | ||| | | || ||||| | Sbjct 778732 GAGTCATGCTTAACATGGTCCTCCTTGTCAGCTGATCCTCTCAAACTCATTGCCCCTTAG 778673 Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401 |||| |||| |||| | |||| |||||| | | | |||||| || Sbjct 778672 CTGTTGTTTGACTAGGTT------------AGTGAGAATCTTGGTCGTTAATTCATACG- 778626 Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 || |||||||||||| ||||||||| ||||||||||||| ||||||||||| | ||| Sbjct 778625 -TCTCTAATTAGATGATAAGGCATTTGACTACCTTAAGAGACTCATAGTTACT-CTGCCA 778568 Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 |||| ||| |||||||||||| ||| ||||||| | |||||||||||||||| Sbjct 778567 TTTA--TTACCTTCGTTGAATTTCTTTACTCTGACATTGGATGTACTGGGCAGAAATCAC 778510 Query 522 ATTGCGTCAA 531 || | |||| Sbjct 778509 ATCACATCAA 778500 >seq487 Length=533691 Score = 109 bits (120), Expect = 2e-21 Identities = 128/168 (76%), Gaps = 15/168 (9%) Strand=Plus/Plus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 ||||||||| |||||| | || |||||||| ||||||| || ||||||| ||| | Sbjct 484159 AAGCTCAACCAGGTCTT---TGCCTGCTGATTCTGCCAAGCTAATTGCCTTGGCAGTG-T 484214 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 ||| | |||| ||| ||||| ||||||| | || |||||| || |||||| Sbjct 484215 TTCCATGGATACTAGGTAGGGGCAGTGGGGGTT--GT------ATTCATAGGCATCACTA 484266 Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 ||| |||| |||||||||||||| |||| ||||||||||||||||| Sbjct 484267 CTTA-ATGATGAGGCATTTGGCTATCTTA--AGAGTCATAGTTACTCC 484311 >seq5773 Length=144844 Score = 107 bits (118), Expect = 6e-21 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| ||||||||||||||||||| Sbjct 126591 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCGTTACC 126532 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||| ||| ||||||||||||||| || |||| Sbjct 126531 GTTTGACAGGTGTACCGCCGCAGTCAAACTCCCCACCTGGCACTGTC 126485 >seq14249 Length=54223 Score = 102 bits (112), Expect = 3e-19 Identities = 66/71 (93%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | | Sbjct 52992 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCTGTTCCCTTGGCTGTGGTTTCG-TTGGT 52934 Query 359 AGTAGATAGGG 369 ||||| ||||| Sbjct 52933 AGTAGGTAGGG 52923 >seq6871 Length=125326 Score = 102 bits (112), Expect = 3e-19 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 |||||||| ||| |||||||||||| || ||||||| | |||| ||||||||||||||| Sbjct 58284 ACCTTAAGGGAGGCATAGTTACTCCTGCTGTTTACCTGTGCTTCCTTGAATTTCTTCACT 58343 Query 492 TTGACATTCAGAGCAC 507 |||||||||||||||| Sbjct 58344 TTGACATTCAGAGCAC 58359 >seq106 Length=885079 Score = 95.1 bits (104), Expect = 4e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367 |||| | ||||||| |||||||| |||||||||||| ||||| | ||||||||| ||| Sbjct 814935 TTCCTTGATGATTCCAGCAAGCCCGGTCCCTTGGCTGTAGTTTCTCCAGATAGTAGGTAG 814876 Query 368 GGACAGTGGGAATCTCGTTAATCCATT 394 ||| ||||| |||||| || ||||||| Sbjct 814875 GGAGAGTGGAAATCTCATTTATCCATT 814849 >seq7971 Length=110042 Score = 80.6 bits (88), Expect = 9e-13 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||| ||||||||||||||| || |||||||||||||||||||||| || Sbjct 104105 TTCTTTCCCTGCTGATTCCGCCAAGGCCTTTCCCTTGGCTGTGGTTTCGCTGGA 104158 >seq33370 Length=1981 Score = 75.2 bits (82), Expect = 4e-11 Identities = 68/84 (81%), Gaps = 4/84 (5%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAG-TCCC---CCTTAGGACACCTGCGT 62 ||| ||||| || |||| ||||||| |||| |||| || | ||||||||||||||||| Sbjct 1547 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCTCGCCTTAGGACACCTGCGT 1606 Query 63 TATGGTTTAACAGATGTGCCGCCC 86 || |||| |||| ||| |||||| Sbjct 1607 TACCGTTTGACAGGTGTACCGCCC 1630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634264616544