Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq3255 389 1e-105
seq7012 313 8e-83
seq875 197 5e-48
seq10005 147 7e-33
seq50 131 5e-28
seq487 109 2e-21
seq5773 107 6e-21
seq14249 102 3e-19
seq6871 102 3e-19
seq106 95.1 4e-17
seq7971 80.6 9e-13
seq33370 75.2 4e-11
>seq3255
Length=215076
Score = 389 bits (430), Expect = 1e-105
Identities = 265/297 (89%), Gaps = 1/297 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||||||||| |||||| || ||||| | | | ||||||||| ||||||||
Sbjct 147318 CTCCCACTTATTCTACATCTCTCAT-TCTCTTCACCATGCCAGACTAGAGTTAAGCTCAA 147376
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||| || |||||||||||||||| ||||||||||||||| ||||||| |
Sbjct 147377 CAGGGTCTTCTTTCTCCTCTGATTCCGCCAAGCCTGTTCCCTTGGCTGTGTTTTCGCTGG 147436
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||| |||||||||||||| || ||||||||||| || |||||||||||||
Sbjct 147437 ATAGTAGGTAGGAACAGTGGGAATCTCATTCATCCATTCATGTGCACCACTAATTAGATG 147496
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
|||||| ||||| |||||| |||||||||||||||||||| ||| ||||||| ||||
Sbjct 147497 ACGAGGTATTTGACTACCTGAAGAGAGTCATAGTTACTCCTGCCATTTACCCAAGCTTCA 147556
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 147557 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 147613
Score = 86.0 bits (94), Expect = 2e-14
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||| || ||||||| |||| ||| ||||||||||||||| | |||
Sbjct 147018 CTTCTGCTCCACAAGAAGTTTCTGTCCTCCCTGAACTCCCCTTAGGACACCTACATTACC 147077
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| || |||| | |||||||||||||| || ||||
Sbjct 147078 ATTTGACAGGTGTACCACCCCTGTCAAACTCCCCACCTTGCACTGTC 147124
>seq7012
Length=123366
Score = 313 bits (346), Expect = 8e-83
Identities = 248/297 (84%), Gaps = 3/297 (1%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||| |||||||| |||| |||||| | | ||||||||| ||||||||
Sbjct 76315 CTCCCACTTAT---ACACCTCTTGAGTCTTTTCACTGTGCCAGACTAGAGTGAAGCTCAA 76371
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
| ||| || ||||||| ||||||| ||||| || || ||||||||||||||| ||| |
Sbjct 76372 CGGGGACTCATTTCCCCACTGATTCTGCCAAACCTCTTTCCTTGGCTGTGGTTTTGCTGG 76431
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||||||||||||||||| || |||||||||||| ||| |||||||||||
Sbjct 76432 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCATGTCCCTAATTAGATG 76491
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
|| | |||||||||||| ||||||||||| |||||||| || || |||| | | ||||
Sbjct 76492 ACAAAGCATTTGGCTACTTTAAGAGAGTCTTAGTTACTTCCACCATTTATCAGAGCTTCA 76551
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||| ||||||||||||||||||||| | |||| || || ||||||||||| ||||||
Sbjct 76552 TTGGATTTCTTCACTTTGACATTCACAACACTAGGTAGCAATCACATTGCATCAACA 76608
>seq875
Length=424381
Score = 197 bits (218), Expect = 5e-48
Identities = 219/287 (76%), Gaps = 5/287 (2%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCA 295
|||||||||| ||| |||||| || ||||| | | | || || ||||| | |||
Sbjct 132500 CTCCCACTTAATCTTCACCTCCTGTCTCTCTTCACCATGCCAGGTTTACAGTCAGGTTCA 132559
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
|||| |||||||| || | |||| ||||| || | || ||||||| ||||| | |
Sbjct 132560 ACAG--TCTTCTTTGGCCACAGATTTTGCCAAACCA-TCCCTTTGGCTGCAGTTTCACCA 132616
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|||| ||| || || ||| |||| || || |||||||||||| || ||||||||||
Sbjct 132617 GATAATAGGTAAAGAGAGTAGGAACATCATTCATCCATTCATGCATATCCCTAATTAGAT 132676
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GCCGTTTACCCGCGCTT 474
| ||||||||||||||||||||||||||||||||||| ||| | |||||| | || |
Sbjct 132677 GGTGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACACCCATCAATTTACCTGAGCCT 132736
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521
||||||||| || |||| |||||| ||| ||||||| |||||||
Sbjct 132737 CACTGAATTTCTCCATTTTGCCATTCAAAGCCCTGGGCAAAAATCAC 132783
>seq10005
Length=87492
Score = 147 bits (162), Expect = 7e-33
Identities = 116/140 (83%), Gaps = 8/140 (6%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||| |||||| |||| | | ||||| ||||||||||||
Sbjct 68231 CTCCCACTTATTCT--------CAAGTCTCTTCATCGCGCCAGACTAAAGTCAAGCTCAA 68282
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||| || ||||||||||||||| |||||||||||||||| ||||| || |
Sbjct 68283 CAGGGTCTTCTTTTCCTGCTGATTCCGCCAAGTCCGTTCCCTTGGCTGTTGTTTCACTGG 68342
Query 357 ATAGTAGATAGGGACAGTGG 376
|||||||||||||||||||
Sbjct 68343 GTAGTAGATAGGGACAGTGG 68362
Score = 78.8 bits (86), Expect = 3e-12
Identities = 76/96 (79%), Gaps = 5/96 (5%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||| |||| || | ||||||| |||| |||| || ||||||||||||||| |||
Sbjct 67938 CTTCTGCCCTACGGGGG-TTTCTGTCCTCCCTGAGCCCGCCTTAGGACACCTGCATTACC 67996
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC 102
||| |||| ||| ||||| |||||||||||||
Sbjct 67997 ATTTGACAGGTGTACCGCC----CCAAACTCCCCAC 68028
>seq50
Length=1153066
Score = 131 bits (144), Expect = 5e-28
Identities = 180/250 (72%), Gaps = 19/250 (8%)
Strand=Plus/Minus
Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT--CCCTTGG 341
|||||| ||| |||| |||| || || | |||||| | ||| | | || ||||| |
Sbjct 778732 GAGTCATGCTTAACATGGTCCTCCTTGTCAGCTGATCCTCTCAAACTCATTGCCCCTTAG 778673
Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401
|||| |||| |||| | |||| |||||| | | | |||||| ||
Sbjct 778672 CTGTTGTTTGACTAGGTT------------AGTGAGAATCTTGGTCGTTAATTCATACG- 778626
Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461
|| |||||||||||| ||||||||| ||||||||||||| ||||||||||| | |||
Sbjct 778625 -TCTCTAATTAGATGATAAGGCATTTGACTACCTTAAGAGACTCATAGTTACT-CTGCCA 778568
Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521
|||| ||| |||||||||||| ||| ||||||| | ||||||||||||||||
Sbjct 778567 TTTA--TTACCTTCGTTGAATTTCTTTACTCTGACATTGGATGTACTGGGCAGAAATCAC 778510
Query 522 ATTGCGTCAA 531
|| | ||||
Sbjct 778509 ATCACATCAA 778500
>seq487
Length=533691
Score = 109 bits (120), Expect = 2e-21
Identities = 128/168 (76%), Gaps = 15/168 (9%)
Strand=Plus/Plus
Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348
||||||||| |||||| | || |||||||| ||||||| || ||||||| ||| |
Sbjct 484159 AAGCTCAACCAGGTCTT---TGCCTGCTGATTCTGCCAAGCTAATTGCCTTGGCAGTG-T 484214
Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408
||| | |||| ||| ||||| ||||||| | || |||||| || ||||||
Sbjct 484215 TTCCATGGATACTAGGTAGGGGCAGTGGGGGTT--GT------ATTCATAGGCATCACTA 484266
Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
||| |||| |||||||||||||| |||| |||||||||||||||||
Sbjct 484267 CTTA-ATGATGAGGCATTTGGCTATCTTA--AGAGTCATAGTTACTCC 484311
>seq5773
Length=144844
Score = 107 bits (118), Expect = 6e-21
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| |||||||||||||||||||
Sbjct 126591 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCGTTACC 126532
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||| ||| ||||||||||||||| || ||||
Sbjct 126531 GTTTGACAGGTGTACCGCCGCAGTCAAACTCCCCACCTGGCACTGTC 126485
>seq14249
Length=54223
Score = 102 bits (112), Expect = 3e-19
Identities = 66/71 (93%), Gaps = 1/71 (1%)
Strand=Plus/Minus
Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| | | |
Sbjct 52992 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCTGTTCCCTTGGCTGTGGTTTCG-TTGGT 52934
Query 359 AGTAGATAGGG 369
||||| |||||
Sbjct 52933 AGTAGGTAGGG 52923
>seq6871
Length=125326
Score = 102 bits (112), Expect = 3e-19
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491
|||||||| ||| |||||||||||| || ||||||| | |||| |||||||||||||||
Sbjct 58284 ACCTTAAGGGAGGCATAGTTACTCCTGCTGTTTACCTGTGCTTCCTTGAATTTCTTCACT 58343
Query 492 TTGACATTCAGAGCAC 507
||||||||||||||||
Sbjct 58344 TTGACATTCAGAGCAC 58359
>seq106
Length=885079
Score = 95.1 bits (104), Expect = 4e-17
Identities = 73/87 (84%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367
|||| | ||||||| |||||||| |||||||||||| ||||| | ||||||||| |||
Sbjct 814935 TTCCTTGATGATTCCAGCAAGCCCGGTCCCTTGGCTGTAGTTTCTCCAGATAGTAGGTAG 814876
Query 368 GGACAGTGGGAATCTCGTTAATCCATT 394
||| ||||| |||||| || |||||||
Sbjct 814875 GGAGAGTGGAAATCTCATTTATCCATT 814849
>seq7971
Length=110042
Score = 80.6 bits (88), Expect = 9e-13
Identities = 50/54 (93%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||| ||||||||||||||| || |||||||||||||||||||||| ||
Sbjct 104105 TTCTTTCCCTGCTGATTCCGCCAAGGCCTTTCCCTTGGCTGTGGTTTCGCTGGA 104158
>seq33370
Length=1981
Score = 75.2 bits (82), Expect = 4e-11
Identities = 68/84 (81%), Gaps = 4/84 (5%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAG-TCCC---CCTTAGGACACCTGCGT 62
||| ||||| || |||| ||||||| |||| |||| || | |||||||||||||||||
Sbjct 1547 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCTCGCCTTAGGACACCTGCGT 1606
Query 63 TATGGTTTAACAGATGTGCCGCCC 86
|| |||| |||| ||| ||||||
Sbjct 1607 TACCGTTTGACAGGTGTACCGCCC 1630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634264616544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |