Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09]
57,203 sequences; 2,849,453,582 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq5846 268 3e-69
seq3998 217 4e-54
seq5558 134 4e-29
seq35693 131 5e-28
seq6847 122 3e-25
seq1850 116 1e-23
seq20389 114 4e-23
seq413 114 4e-23
seq4975 113 1e-22
seq5908 111 5e-22
seq19706 109 2e-21
seq6233 105 2e-20
seq16360 102 2e-19
seq16326 96.9 1e-17
seq4400 95.1 4e-17
seq6439 93.3 1e-16
seq13719 89.7 2e-15
seq5510 84.2 7e-14
>seq5846
Length=143565
Score = 268 bits (296), Expect = 3e-69
Identities = 396/558 (71%), Gaps = 70/558 (13%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||| ||||| | |||||||||||
Sbjct 110170 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTGATGTTATTTTTCGTCACTACCTC 110111
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| ||||| || ||||||| |||||||||||||||||||||||||| | |||
Sbjct 110110 CCTGTGTCAGGCGTGGGTAA--------CCTGCTGCCTTCCTTGGATGTGGTAGACATTT 110059
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
| ||||||||||||| | |||| || ||| |||||| || |||||| | |||||| |||
Sbjct 110058 CCCAGGCTCCCTCTCTGAAATCAAAGCCTGATTCCCTGTCACCCGTGGTCACCATGATAG 109999
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| |||||||||||||||||||| ||||| || ||||| | |||||| | |
Sbjct 109998 GCATGGCAACTACCATCGAAAGTTGATAGAGCAGACGTTCGAATGGGTCGTCGCCGCCAC 109939
Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGG----------------- 281
|| | |||||| | | ||||| || ||||||| |
Sbjct 109938 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCAGGGCCCACCCC 109879
Query 282 --AGCC----CCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACA-----C 320
|||| ||| ||| | ||||| |||| |||| |||||| || |
Sbjct 109878 CAAGCCGGGGCCGGAGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCACGTATC 109820
Query 321 CCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373
||| | ||| ||||| | |||||| |||||||||||||||||||| |||
Sbjct 109819 CCCCCACAAAG--GGGGTCAGCACCCGTCAGCATGCATTAGCTCTAGAATTACCACAGTT 109762
Query 374 ATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCG 428
||||| |||| | || | | | |||| ||| |||||||||||||| |||||||||
Sbjct 109761 ATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATAAGCCATTCG 109702
Query 429 CAGTTTCACTGTATAG--ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486
||||||||||||| | |||| || ||||||||||||||||||||||||| |||||
Sbjct 109701 CAGTTTCACTGTACTGGCCTTGCGAAT--TTAGACATGCATGGCTTAATCTTTGTGACAA 109644
Query 487 GCATATGACTACTGGCAG 504
|||| |||||||||||
Sbjct 109643 ACATA-AACTACTGGCAG 109627
>seq3998
Length=190197
Score = 217 bits (240), Expect = 4e-54
Identities = 378/542 (70%), Gaps = 67/542 (12%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAA-AGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||| |||||||| | | | |||| || |||| ||||| | ||| |||||
Sbjct 124273 TACTCATTTCAATTACAGGGTCTTGATAGAGTCCAGTATTGTTATTT-TCATCATTACCT 124215
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| | || |||| |||||||| || | |||| ||||||||||||||||||||| || ||
Sbjct 124214 ACTCAGGTTGGGAGTGGGTAATATGTGTGCCTACTGCCTTCCTTGGATGTGGTAACCATT 124155
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||| ||||| ||||||| ||| | | | || ||| | |||| ||||
Sbjct 124154 TCTCAGGCTCCCTCTCTGGAATTGAACCCTGATT-CTCTTCACACGTGGTCACCACGGTA 124096
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||| | |||||||| ||||||||||||||||| | |||| || | || ||
Sbjct 124095 GGC--AGAGACTACCATCAAAAGTTGATAGGGCAGATGATCAAATG---GATTGTCGCCT 124041
Query 241 CAA----GGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGG-----AGC----- 284
||| || | | |||| | | ||||| || ||||||| | |||
Sbjct 124040 CAATGGGGGGCCGGTGATTGGCCCAAGGTTATCTAGAGTCACCAAAGCTGCCAGCACCTG 123981
Query 285 -------------CCCGAAGGG----------CGTTGGTTTTTTATCTAATAAATACA-- 319
||| |||| ||||| |||| |||| |||||| ||
Sbjct 123980 CCCCCTGGCTGGGGCCGGAGGGAGGCTGACCAGGTTGG-TTTTGATCTGATAAATGCAAG 123922
Query 320 ----CCCCTTCCGAA----GTCGGGGT-TTTTAGCATGTATTAGCTCTAGAATTACCACG 370
||| | |||| ||| | | | | |||||||||||||||||||||||||||
Sbjct 123921 CATCACCCCTGCGAAAGGGGTCAGAATCTGTCAGCATGTATTAGCTCTAGAATTACCACA 123862
Query 371 GTTATCCATGTAGTA-AGGTAC----TATCAAATAAACGATAACTGATTTAATGAGCCAT 425
|||||||| |||| | ||| | | |||| ||| |||||||| ||||||||||||
Sbjct 123861 GTTATCCAAGTAGGAGAGGAGCAAGTGACCAAAGGAACCATAACTGAATTAATGAGCCAT 123802
Query 426 TCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484
| ||| ||||||||| | | ||| ||||||||||||||||||||||| |||||||||
Sbjct 123801 TTACAGATTCACTGTACTGGGGTGC--ATACTTAGACATGCATGGCTTAACCTTTGAGAC 123744
Query 485 AA 486
||
Sbjct 123743 AA 123742
>seq5558
Length=149373
Score = 134 bits (148), Expect = 4e-29
Identities = 99/112 (88%), Gaps = 5/112 (4%)
Strand=Plus/Plus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452
|||| ||| ||||||||||||||||||||| | ||||||||||||| | | ||| |
Sbjct 17214 CAAAGGAACCATAACTGATTTAATGAGCCATCCACAGTTTCACTGTACTGGTCATGC--A 17271
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 17272 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 17322
>seq35693
Length=1502
Score = 131 bits (144), Expect = 5e-28
Identities = 99/112 (88%), Gaps = 5/112 (4%)
Strand=Plus/Plus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452
|||| ||| ||||||||||||||||||||| |||||||||||||| || ||| |
Sbjct 1076 CAAAGGAACCATAACTGATTTAATGAGCCATCTGCAGTTTCACTGTACCAGCCATGC--A 1133
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1134 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT-ACTACTGGCAG 1184
>seq6847
Length=125773
Score = 122 bits (134), Expect = 3e-25
Identities = 117/147 (80%), Gaps = 10/147 (7%)
Strand=Plus/Minus
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT-----ATCAAATAAACGATA 407
||||||||||| ||| ||||||||| |||| | | | | | |||| |||| |||
Sbjct 43312 AGCTCTAGAATCACC--GGTTATCCAAGTAGGAGAGGAGTGAGTGACCAAAGAAACCATA 43255
Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCA 466
|||||||||||||||||||| |||||||||||| || ||| ||||||||||||||
Sbjct 43254 ACTGATTTAATGAGCCATTCATAGTTTCACTGTACCAGCCTGC--GTACTTAGACATGCA 43197
Query 467 TGGCTTAATCTTTGAGACAAGCATATG 493
| | |||||||| |||||||||||||
Sbjct 43196 TAGTTTAATCTTCCAGACAAGCATATG 43170
>seq1850
Length=300127
Score = 116 bits (128), Expect = 1e-23
Identities = 122/157 (78%), Gaps = 4/157 (3%)
Strand=Plus/Minus
Query 4 CTCATTCCAATTACAAGACCC--AAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||| |||||||||| | ||||||| ||||||| ||||| |||||||||||||
Sbjct 70957 CTCATTTCAATTACAAGGTCTCTAAAAGAGTCCTGTATTGTTATTTTTTGTCACTACCTC 70898
Query 62 CCCGTGTCG-GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|| || ||| |||||||||||| | || ||| |||||||||||||||| | || ||
Sbjct 70897 CCTTCTACGAGGAGTGGGTAATTTGCCCACCAGCT-CCTTCCTTGGATGTGGCATCCATT 70839
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCC 157
|||||| ||| ||| || | |||||| ||||||
Sbjct 70838 TCTCAGTTCTCCTTTCCCCAAACAAACCCTGATTCCC 70802
>seq20389
Length=24161
Score = 114 bits (126), Expect = 4e-23
Identities = 96/113 (85%), Gaps = 6/113 (5%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452
|||| ||| ||||||||||||||||| || | | ||||||||||| | | ||| |
Sbjct 22060 CAAAGGAACCATAACTGATTTAATGAGGTATCCACGGTTTCACTGTACTGGTCATGC--A 22003
Query 453 TACTTAGACATGCATGG-CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 22002 TACTTAGACATGCATGGCCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 21951
>seq413
Length=569479
Score = 114 bits (126), Expect = 4e-23
Identities = 92/110 (84%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454
|||| ||| ||||||||||||||||||||| ||||||||||||||| | |||
Sbjct 554914 CAAAGGAACCATAACTGATTTAATGAGCCATCCGCAGTTTCACTGTACCGGCCATGAATA 554973
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||| ||||||||||||||| ||||||||||||||| |||| ||||
Sbjct 554974 CTTAGACGTGCATGGCTTAATCTCTGAGACAAGCATATG-GTACTAGCAG 555022
>seq4975
Length=162709
Score = 113 bits (124), Expect = 1e-22
Identities = 129/166 (78%), Gaps = 12/166 (7%)
Strand=Plus/Plus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AG----GTACTATCAAAT 399
||||||||||||||||||||||||| |||||| | |||| | || | || ||||
Sbjct 134742 CATGTATTAGCTCTAGAATTACCACAGTTATCTAAGTAGGAGAGGAGTGAACGGCCAAAG 134801
Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG-TATAGAT-TGCTTATACTT 457
| | |||| |||||| |||||||||||| |||||||| | || | ||| ||||||
Sbjct 134802 GACCCATAAGTGATTTCATGAGCCATTCGGAGTTTCACCGCCCCAGCTGTGC--ATACTT 134859
Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
||||| |||||| || |||| | |||||||| ||| |||||||||
Sbjct 134860 AGACACGCATGGATTCATCTCT--GACAAGCACATG-CTACTGGCA 134902
>seq5908
Length=142616
Score = 111 bits (122), Expect = 5e-22
Identities = 83/96 (86%), Gaps = 1/96 (1%)
Strand=Plus/Minus
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468
||||||||||||||||| |||||||| |||||| | | | |||||||||||||||||
Sbjct 54607 CTGATTTAATGAGCCATCCGCAGTTTTACTGTACTGGTGGTGCATACTTAGACATGCATG 54548
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| ||||||| ||||||||||||| ||||||||||
Sbjct 54547 GCCTAATCTTCCAGACAAGCATATG-CTACTGGCAG 54513
>seq19706
Length=26679
Score = 109 bits (120), Expect = 2e-21
Identities = 80/92 (87%), Gaps = 1/92 (1%)
Strand=Plus/Minus
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472
||||||||||||||||||||||||||||| | | ||||||||||| ||||||||
Sbjct 5621 TTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATACATGGCTT 5562
Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| |||||||||||||||||| ||||||||||
Sbjct 5561 AACCTTTGAGACAAGCATATG-CTACTGGCAG 5531
>seq6233
Length=136718
Score = 105 bits (116), Expect = 2e-20
Identities = 93/111 (84%), Gaps = 5/111 (5%)
Strand=Plus/Plus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452
|||| ||| |||||||||||||||||||||| ||||||| ||||| || ||| ||
Sbjct 117162 CAAAGGAACTGTAACTGATTTAATGAGCCATTCACAGTTTCTCTGTACCAGCCATGCGTA 117221
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
|||||||| |||||| |||||||||||||||||||| || |||||||||
Sbjct 117222 --CTTAGACAGGCATGGTTTAATCTTTGAGACAAGCATGTG-CTACTGGCA 117269
>seq16360
Length=41754
Score = 102 bits (112), Expect = 2e-19
Identities = 85/103 (83%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461
|| ||||| ||||||||||| ||| | ||||||||||||| | | |||||||||
Sbjct 8007 ACCATAACAGATTTAATGAGACATCCACAGTTTCACTGTACCAGCCACGTGTACTTAGAC 7948
Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| ||||||||||||||||||||||||||||| ||| |||||
Sbjct 7947 ATACATGGCTTAATCTTTGAGACAAGCATATG-TTACAGGCAG 7906
>seq16326
Length=41968
Score = 96.9 bits (106), Expect = 1e-17
Identities = 74/89 (83%), Gaps = 9/89 (10%)
Strand=Plus/Minus
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
||||||||||||||||||||| |||||||||||||| | |||||||||| |
Sbjct 41799 ATAACTGATTTAATGAGCCATCTGCAGTTTCACTGTACA---------TACTTAGACAGG 41749
Query 465 CATGGCTTAATCTTTGAGACAAGCATATG 493
| ||||||| |||||||||||||||||||
Sbjct 41748 CGTGGCTTAGTCTTTGAGACAAGCATATG 41720
>seq4400
Length=178589
Score = 95.1 bits (104), Expect = 4e-17
Identities = 124/175 (71%), Gaps = 25/175 (14%)
Strand=Plus/Plus
Query 54 ACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 113
||||| ||||| || |||| |||| ||||||| ||||||||| ||||||||
Sbjct 78047 ACTACTTCCCCAGGTTGGGAGTGGGGAATTTGCATGCCTGCTGCTTTCCTTGG------- 78099
Query 114 AGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATAC 173
||||||||| ||| || |||||| || |||| | |||| | | ||
Sbjct 78100 --------------CTCCCTCTCTGGATTCAAACCCTGATCCCCCATCACCCATGGTCAC 78145
Query 174 CATGGT--AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226
|| || |||| ||| |||||||| ||||||||||||||||| |||||||||
Sbjct 78146 CACTGTCCAGGCAGCTA--CTACCATCCAAAGTTGATAGGGCAGACATTTGAATG 78198
>seq6439
Length=133230
Score = 93.3 bits (102), Expect = 1e-16
Identities = 91/115 (79%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | | ||| || ||||| | ||||| |||||||||||||
Sbjct 123314 ACTCATTCCAATTACAGGGCATTGAAAAAGTCCTGTCTTGTTATTTTTTGTCACTACCTC 123373
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116
|| || ||| |||||||||||||| |||| |||| ||||| |||||| ||||
Sbjct 123374 CCTAGGTGAGGAGTGGGTAATTTGCGCACCTGTTGCCATCCTT-GATGTGATAGC 123427
>seq13719
Length=57577
Score = 89.7 bits (98), Expect = 2e-15
Identities = 102/139 (73%), Gaps = 10/139 (7%)
Strand=Plus/Plus
Query 55 CTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT------ 108
|||||| || | ||| | | || |||||||| | || || |||||||||||||
Sbjct 54730 CTACCTTCCTGGGTCAGAAATGAGTAATTTGTGAGCATGTTGCCTTCCTTGGAACCTCAA 54789
Query 109 ----GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164
||||||||| ||||||||||||||||| | | || || || ||||| || |||
Sbjct 54790 AACAGTGGTAGCCATTTCTCAGGCTCCCTCTTTGAATTCAAATGCTGATTCCTTGTCACC 54849
Query 165 CGTTGATACCATGGTAGGC 183
||| | ||||||||||||
Sbjct 54850 CGTGGTCACCATGGTAGGC 54868
>seq5510
Length=150466
Score = 84.2 bits (92), Expect = 7e-14
Identities = 80/99 (81%), Gaps = 5/99 (5%)
Strand=Plus/Plus
Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTATACTTAGACATGC 465
|| ||| ||||||||||| ||||||| | || || ||| |||||||||||| |
Sbjct 61227 ACCGATGTAATGAGCCATCTGCAGTTTTATCATACTGACCATGC--ATACTTAGACATAC 61284
Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||| ||||||||||||| ||||||||||
Sbjct 61285 ATGGCTTAATCTTCCAGACAAGCATATG-CTACTGGCAG 61322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509536005888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |