Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eschrichtius_20robustus_20[genbank_20GCA_5F002189225.1_202017-06-09] 57,203 sequences; 2,849,453,582 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq5846 268 3e-69 seq3998 217 4e-54 seq5558 134 4e-29 seq35693 131 5e-28 seq6847 122 3e-25 seq1850 116 1e-23 seq20389 114 4e-23 seq413 114 4e-23 seq4975 113 1e-22 seq5908 111 5e-22 seq19706 109 2e-21 seq6233 105 2e-20 seq16360 102 2e-19 seq16326 96.9 1e-17 seq4400 95.1 4e-17 seq6439 93.3 1e-16 seq13719 89.7 2e-15 seq5510 84.2 7e-14 >seq5846 Length=143565 Score = 268 bits (296), Expect = 3e-69 Identities = 396/558 (71%), Gaps = 70/558 (13%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||| ||||| | ||||||||||| Sbjct 110170 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTGATGTTATTTTTCGTCACTACCTC 110111 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || ||||| || ||||||| |||||||||||||||||||||||||| | ||| Sbjct 110110 CCTGTGTCAGGCGTGGGTAA--------CCTGCTGCCTTCCTTGGATGTGGTAGACATTT 110059 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 | ||||||||||||| | |||| || ||| |||||| || |||||| | |||||| ||| Sbjct 110058 CCCAGGCTCCCTCTCTGAAATCAAAGCCTGATTCCCTGTCACCCGTGGTCACCATGATAG 109999 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||| ||||| || ||||| | |||||| | | Sbjct 109998 GCATGGCAACTACCATCGAAAGTTGATAGAGCAGACGTTCGAATGGGTCGTCGCCGCCAC 109939 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGG----------------- 281 || | |||||| | | ||||| || ||||||| | Sbjct 109938 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCAGGGCCCACCCC 109879 Query 282 --AGCC----CCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACA-----C 320 |||| ||| ||| | ||||| |||| |||| |||||| || | Sbjct 109878 CAAGCCGGGGCCGGAGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCACGTATC 109820 Query 321 CCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373 ||| | ||| ||||| | |||||| |||||||||||||||||||| ||| Sbjct 109819 CCCCCACAAAG--GGGGTCAGCACCCGTCAGCATGCATTAGCTCTAGAATTACCACAGTT 109762 Query 374 ATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCG 428 ||||| |||| | || | | | |||| ||| |||||||||||||| ||||||||| Sbjct 109761 ATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATAAGCCATTCG 109702 Query 429 CAGTTTCACTGTATAG--ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486 ||||||||||||| | |||| || ||||||||||||||||||||||||| ||||| Sbjct 109701 CAGTTTCACTGTACTGGCCTTGCGAAT--TTAGACATGCATGGCTTAATCTTTGTGACAA 109644 Query 487 GCATATGACTACTGGCAG 504 |||| ||||||||||| Sbjct 109643 ACATA-AACTACTGGCAG 109627 >seq3998 Length=190197 Score = 217 bits (240), Expect = 4e-54 Identities = 378/542 (70%), Gaps = 67/542 (12%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAA-AGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||| |||||||| | | | |||| || |||| ||||| | ||| ||||| Sbjct 124273 TACTCATTTCAATTACAGGGTCTTGATAGAGTCCAGTATTGTTATTT-TCATCATTACCT 124215 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | | || |||| |||||||| || | |||| ||||||||||||||||||||| || || Sbjct 124214 ACTCAGGTTGGGAGTGGGTAATATGTGTGCCTACTGCCTTCCTTGGATGTGGTAACCATT 124155 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||| ||||| ||||||| ||| | | | || ||| | |||| |||| Sbjct 124154 TCTCAGGCTCCCTCTCTGGAATTGAACCCTGATT-CTCTTCACACGTGGTCACCACGGTA 124096 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| | |||||||| ||||||||||||||||| | |||| || | || || Sbjct 124095 GGC--AGAGACTACCATCAAAAGTTGATAGGGCAGATGATCAAATG---GATTGTCGCCT 124041 Query 241 CAA----GGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGG-----AGC----- 284 ||| || | | |||| | | ||||| || ||||||| | ||| Sbjct 124040 CAATGGGGGGCCGGTGATTGGCCCAAGGTTATCTAGAGTCACCAAAGCTGCCAGCACCTG 123981 Query 285 -------------CCCGAAGGG----------CGTTGGTTTTTTATCTAATAAATACA-- 319 ||| |||| ||||| |||| |||| |||||| || Sbjct 123980 CCCCCTGGCTGGGGCCGGAGGGAGGCTGACCAGGTTGG-TTTTGATCTGATAAATGCAAG 123922 Query 320 ----CCCCTTCCGAA----GTCGGGGT-TTTTAGCATGTATTAGCTCTAGAATTACCACG 370 ||| | |||| ||| | | | | ||||||||||||||||||||||||||| Sbjct 123921 CATCACCCCTGCGAAAGGGGTCAGAATCTGTCAGCATGTATTAGCTCTAGAATTACCACA 123862 Query 371 GTTATCCATGTAGTA-AGGTAC----TATCAAATAAACGATAACTGATTTAATGAGCCAT 425 |||||||| |||| | ||| | | |||| ||| |||||||| |||||||||||| Sbjct 123861 GTTATCCAAGTAGGAGAGGAGCAAGTGACCAAAGGAACCATAACTGAATTAATGAGCCAT 123802 Query 426 TCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGAC 484 | ||| ||||||||| | | ||| ||||||||||||||||||||||| ||||||||| Sbjct 123801 TTACAGATTCACTGTACTGGGGTGC--ATACTTAGACATGCATGGCTTAACCTTTGAGAC 123744 Query 485 AA 486 || Sbjct 123743 AA 123742 >seq5558 Length=149373 Score = 134 bits (148), Expect = 4e-29 Identities = 99/112 (88%), Gaps = 5/112 (4%) Strand=Plus/Plus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452 |||| ||| ||||||||||||||||||||| | ||||||||||||| | | ||| | Sbjct 17214 CAAAGGAACCATAACTGATTTAATGAGCCATCCACAGTTTCACTGTACTGGTCATGC--A 17271 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 17272 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 17322 >seq35693 Length=1502 Score = 131 bits (144), Expect = 5e-28 Identities = 99/112 (88%), Gaps = 5/112 (4%) Strand=Plus/Plus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452 |||| ||| ||||||||||||||||||||| |||||||||||||| || ||| | Sbjct 1076 CAAAGGAACCATAACTGATTTAATGAGCCATCTGCAGTTTCACTGTACCAGCCATGC--A 1133 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1134 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT-ACTACTGGCAG 1184 >seq6847 Length=125773 Score = 122 bits (134), Expect = 3e-25 Identities = 117/147 (80%), Gaps = 10/147 (7%) Strand=Plus/Minus Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT-----ATCAAATAAACGATA 407 ||||||||||| ||| ||||||||| |||| | | | | | |||| |||| ||| Sbjct 43312 AGCTCTAGAATCACC--GGTTATCCAAGTAGGAGAGGAGTGAGTGACCAAAGAAACCATA 43255 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCA 466 |||||||||||||||||||| |||||||||||| || ||| |||||||||||||| Sbjct 43254 ACTGATTTAATGAGCCATTCATAGTTTCACTGTACCAGCCTGC--GTACTTAGACATGCA 43197 Query 467 TGGCTTAATCTTTGAGACAAGCATATG 493 | | |||||||| ||||||||||||| Sbjct 43196 TAGTTTAATCTTCCAGACAAGCATATG 43170 >seq1850 Length=300127 Score = 116 bits (128), Expect = 1e-23 Identities = 122/157 (78%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACCC--AAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||| |||||||||| | ||||||| ||||||| ||||| ||||||||||||| Sbjct 70957 CTCATTTCAATTACAAGGTCTCTAAAAGAGTCCTGTATTGTTATTTTTTGTCACTACCTC 70898 Query 62 CCCGTGTCG-GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || || ||| |||||||||||| | || ||| |||||||||||||||| | || || Sbjct 70897 CCTTCTACGAGGAGTGGGTAATTTGCCCACCAGCT-CCTTCCTTGGATGTGGCATCCATT 70839 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCC 157 |||||| ||| ||| || | |||||| |||||| Sbjct 70838 TCTCAGTTCTCCTTTCCCCAAACAAACCCTGATTCCC 70802 >seq20389 Length=24161 Score = 114 bits (126), Expect = 4e-23 Identities = 96/113 (85%), Gaps = 6/113 (5%) Strand=Plus/Minus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452 |||| ||| ||||||||||||||||| || | | ||||||||||| | | ||| | Sbjct 22060 CAAAGGAACCATAACTGATTTAATGAGGTATCCACGGTTTCACTGTACTGGTCATGC--A 22003 Query 453 TACTTAGACATGCATGG-CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 22002 TACTTAGACATGCATGGCCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 21951 >seq413 Length=569479 Score = 114 bits (126), Expect = 4e-23 Identities = 92/110 (84%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 |||| ||| ||||||||||||||||||||| ||||||||||||||| | ||| Sbjct 554914 CAAAGGAACCATAACTGATTTAATGAGCCATCCGCAGTTTCACTGTACCGGCCATGAATA 554973 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||| ||||||||||||||| ||||||||||||||| |||| |||| Sbjct 554974 CTTAGACGTGCATGGCTTAATCTCTGAGACAAGCATATG-GTACTAGCAG 555022 >seq4975 Length=162709 Score = 113 bits (124), Expect = 1e-22 Identities = 129/166 (78%), Gaps = 12/166 (7%) Strand=Plus/Plus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AG----GTACTATCAAAT 399 ||||||||||||||||||||||||| |||||| | |||| | || | || |||| Sbjct 134742 CATGTATTAGCTCTAGAATTACCACAGTTATCTAAGTAGGAGAGGAGTGAACGGCCAAAG 134801 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG-TATAGAT-TGCTTATACTT 457 | | |||| |||||| |||||||||||| |||||||| | || | ||| |||||| Sbjct 134802 GACCCATAAGTGATTTCATGAGCCATTCGGAGTTTCACCGCCCCAGCTGTGC--ATACTT 134859 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||||| |||||| || |||| | |||||||| ||| ||||||||| Sbjct 134860 AGACACGCATGGATTCATCTCT--GACAAGCACATG-CTACTGGCA 134902 >seq5908 Length=142616 Score = 111 bits (122), Expect = 5e-22 Identities = 83/96 (86%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||||||||||||||| |||||||| |||||| | | | ||||||||||||||||| Sbjct 54607 CTGATTTAATGAGCCATCCGCAGTTTTACTGTACTGGTGGTGCATACTTAGACATGCATG 54548 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||| ||||||||||||| |||||||||| Sbjct 54547 GCCTAATCTTCCAGACAAGCATATG-CTACTGGCAG 54513 >seq19706 Length=26679 Score = 109 bits (120), Expect = 2e-21 Identities = 80/92 (87%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 ||||||||||||||||||||||||||||| | | ||||||||||| |||||||| Sbjct 5621 TTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATACATGGCTT 5562 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 || |||||||||||||||||| |||||||||| Sbjct 5561 AACCTTTGAGACAAGCATATG-CTACTGGCAG 5531 >seq6233 Length=136718 Score = 105 bits (116), Expect = 2e-20 Identities = 93/111 (84%), Gaps = 5/111 (5%) Strand=Plus/Plus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452 |||| ||| |||||||||||||||||||||| ||||||| ||||| || ||| || Sbjct 117162 CAAAGGAACTGTAACTGATTTAATGAGCCATTCACAGTTTCTCTGTACCAGCCATGCGTA 117221 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 |||||||| |||||| |||||||||||||||||||| || ||||||||| Sbjct 117222 --CTTAGACAGGCATGGTTTAATCTTTGAGACAAGCATGTG-CTACTGGCA 117269 >seq16360 Length=41754 Score = 102 bits (112), Expect = 2e-19 Identities = 85/103 (83%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||| ||||||||||| ||| | ||||||||||||| | | ||||||||| Sbjct 8007 ACCATAACAGATTTAATGAGACATCCACAGTTTCACTGTACCAGCCACGTGTACTTAGAC 7948 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||||||||||||||||||||||| ||| ||||| Sbjct 7947 ATACATGGCTTAATCTTTGAGACAAGCATATG-TTACAGGCAG 7906 >seq16326 Length=41968 Score = 96.9 bits (106), Expect = 1e-17 Identities = 74/89 (83%), Gaps = 9/89 (10%) Strand=Plus/Minus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||||||||||||||| |||||||||||||| | |||||||||| | Sbjct 41799 ATAACTGATTTAATGAGCCATCTGCAGTTTCACTGTACA---------TACTTAGACAGG 41749 Query 465 CATGGCTTAATCTTTGAGACAAGCATATG 493 | ||||||| ||||||||||||||||||| Sbjct 41748 CGTGGCTTAGTCTTTGAGACAAGCATATG 41720 >seq4400 Length=178589 Score = 95.1 bits (104), Expect = 4e-17 Identities = 124/175 (71%), Gaps = 25/175 (14%) Strand=Plus/Plus Query 54 ACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 113 ||||| ||||| || |||| |||| ||||||| ||||||||| |||||||| Sbjct 78047 ACTACTTCCCCAGGTTGGGAGTGGGGAATTTGCATGCCTGCTGCTTTCCTTGG------- 78099 Query 114 AGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATAC 173 ||||||||| ||| || |||||| || |||| | |||| | | || Sbjct 78100 --------------CTCCCTCTCTGGATTCAAACCCTGATCCCCCATCACCCATGGTCAC 78145 Query 174 CATGGT--AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226 || || |||| ||| |||||||| ||||||||||||||||| ||||||||| Sbjct 78146 CACTGTCCAGGCAGCTA--CTACCATCCAAAGTTGATAGGGCAGACATTTGAATG 78198 >seq6439 Length=133230 Score = 93.3 bits (102), Expect = 1e-16 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | | ||| || ||||| | ||||| ||||||||||||| Sbjct 123314 ACTCATTCCAATTACAGGGCATTGAAAAAGTCCTGTCTTGTTATTTTTTGTCACTACCTC 123373 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116 || || ||| |||||||||||||| |||| |||| ||||| |||||| |||| Sbjct 123374 CCTAGGTGAGGAGTGGGTAATTTGCGCACCTGTTGCCATCCTT-GATGTGATAGC 123427 >seq13719 Length=57577 Score = 89.7 bits (98), Expect = 2e-15 Identities = 102/139 (73%), Gaps = 10/139 (7%) Strand=Plus/Plus Query 55 CTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT------ 108 |||||| || | ||| | | || |||||||| | || || ||||||||||||| Sbjct 54730 CTACCTTCCTGGGTCAGAAATGAGTAATTTGTGAGCATGTTGCCTTCCTTGGAACCTCAA 54789 Query 109 ----GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164 ||||||||| ||||||||||||||||| | | || || || ||||| || ||| Sbjct 54790 AACAGTGGTAGCCATTTCTCAGGCTCCCTCTTTGAATTCAAATGCTGATTCCTTGTCACC 54849 Query 165 CGTTGATACCATGGTAGGC 183 ||| | |||||||||||| Sbjct 54850 CGTGGTCACCATGGTAGGC 54868 >seq5510 Length=150466 Score = 84.2 bits (92), Expect = 7e-14 Identities = 80/99 (81%), Gaps = 5/99 (5%) Strand=Plus/Plus Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTATACTTAGACATGC 465 || ||| ||||||||||| ||||||| | || || ||| |||||||||||| | Sbjct 61227 ACCGATGTAATGAGCCATCTGCAGTTTTATCATACTGACCATGC--ATACTTAGACATAC 61284 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||| ||||||||||||| |||||||||| Sbjct 61285 ATGGCTTAATCTTCCAGACAAGCATATG-CTACTGGCAG 61322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509536005888