Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq159875 149 9e-34 >seq159875 Length=83953389 Score = 149 bits (164), Expect = 9e-34 Identities = 185/248 (75%), Gaps = 9/248 (4%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 14823457 CTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTAGCAGAGTGCT 14823515 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA----C 122 ||||||||| ||||||||||| || ||||||||||||||| | ||| | | Sbjct 14823516 GTGTTTTTAATAAACAGTCGCAGCCACCTATTCTCTGCGACCCTCCTGGGCTTACGGAGC 14823575 Query 123 ACGTCGTTCACC--AGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | ||| || ||| || || |||| ||||||||||||||||||| || |||||||| Sbjct 14823576 AAGTCCTTAACCTTAG-AG-GGCATACCTTCTCCCGAAGTTACGGTATCAATTTGCCGAG 14823633 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| || ||||| | | | |||||||| || ||| | | |||| |||||||| Sbjct 14823634 TTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCGCACCAGTGTCGGT 14823693 Query 241 TTACGGTA 248 || ||||| Sbjct 14823694 TTGCGGTA 14823701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692599686625