Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq63847 163 7e-38 >seq63847 Length=148068395 Score = 163 bits (180), Expect = 7e-38 Identities = 139/166 (84%), Gaps = 8/166 (5%) Strand=Plus/Minus Query 123 CCCAGCGACT-AGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTA 181 |||||||||| | ||||||| | |||||| ||| | ||||| || ||||||||||||| Sbjct 46336732 CCCAGCGACTGATTCGCCCTATTCGGACTCGATTT-CTCTACGGCTTCCCTATTCGGTTA 46336674 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 46336673 ACCTT-GCCACTGAATGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC--- 46336618 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATT 287 | ||||||| ||| ||||| |||| ||||||||||||||||| Sbjct 46336617 -TTGCGGGCTCCTACT-TTTGTAAGCATGCGGTTTCAGGATCTATT 46336574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1238277168000