Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq264128 104 2e-20 seq192934 89.7 4e-16 >seq264128 Length=505 Score = 104 bits (114), Expect = 2e-20 Identities = 124/163 (76%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTT-CTGGGATTAGCTCCCCCTCGCG 60 |||||||||| || ||||||| ||| ||| |||| | | |||||||| || || | Sbjct 184 CGAGTTGCAGCCTCCAATCCGAACTGAGATCGGCTTTTCAGAGATTAGCTTGCCGTCACC 243 Query 61 GGTTGGCGGCC-CTCTGTATGTACCA-TTGTATGACGTGTGAAGCCCTACCCATAAGGGC 118 || | || | | |||| |||| ||||| ||||||| ||||| |||||||| Sbjct 244 GGCTCGCAAACTCGTTGTACCGACCAATTGTAGCACGTGTGTAGCCCAGGTCATAAGGGG 303 Query 119 CATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||| || ||||||||||||||| |||||||||||||||||| Sbjct 304 CATGATGATTTGACGTCATCCCCA-CTTCCTCCGGTTTGTCAC 345 >seq192934 Length=847 Score = 89.7 bits (98), Expect = 4e-16 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 35 CTTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGAC 94 ||||| | |||| || | | |||| | | || |||||||||| ||||||||| || Sbjct 18 CTTTC-GAGATTTGCATCACATCGCTGTGTAGCTGCCCTCTGTACCGGCCATTGTATTAC 76 Query 95 GTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||||| |||| | | |||||||| ||| || ||||||||||||||||||||||| Sbjct 77 GTGTGTGGCCCAAGACGTAAGGGCCGTGATGATTTGACGTCATCCCCACCTTCCTC 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414921471250