Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq139997 107 8e-18 >seq139997 Length=61081816 Score = 107 bits (118), Expect = 8e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||||| |||| ||||||||||||||||||||| | |||||||| ||||||| Sbjct 2364257 CTCCTTGAGTCGCGGCACGCCCAGGGTCACGTTCTTGGCAGACACGCCGGCGTAGTGGAA 2364198 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | | ||||| ||| ||| |||||| || | | |||| | || ||| || || Sbjct 2364197 GGTGTTCAAGGTCATCTGGGTGGCGGGCTCTCCAAGGGACTGTGCAGCCAGGGCCCCCAC 2364138 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 2364137 CATCTCCCCGGG 2364126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2077416390689750