Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq55403 82.4 4e-14 seq464606 78.8 5e-13 seq119152 71.6 8e-11 >seq55403 Length=1807 Score = 82.4 bits (90), Expect = 4e-14 Identities = 91/120 (76%), Gaps = 6/120 (5%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| ||||||||| | | || ||| |||| |||| |||| || || | ||| Sbjct 912 GAACCCGAAGACTTTGGTGCCCCGGAAGCTGCCCAGCGGGTCA---TGGGAATAATGCCG 968 Query 61 G---ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| | ||||||| | |||||||| | ||||||||||||||||||||||||||| Sbjct 969 GTGCATCACCAGTCGGCGTCATTTACGGTCAGAACTACGACGGTATCTGATCGTCTTCGA 1028 >seq464606 Length=586 Score = 78.8 bits (86), Expect = 5e-13 Identities = 90/120 (75%), Gaps = 6/120 (5%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| ||||||||| | | || ||| |||| |||| |||| || || | ||| Sbjct 543 GAACCCGAAGACTTTGGTGCCCCGGAAGCTGCCCAGCGGGTCA---TGGGAATAATGCCG 487 Query 61 G---ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| | |||| |||| |||||||| ||||||||||||||||||||||||||| Sbjct 486 GTGCATCACCAGTCAGCATCATTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 427 >seq119152 Length=218 Score = 71.6 bits (78), Expect = 8e-11 Identities = 57/69 (83%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 ||||| |||| ||| | ||||||||| ||||| ||| |||||||||||||||||| Sbjct 88 ATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGAT 29 Query 109 CGTCTTCGA 117 ||||||||| Sbjct 28 CGTCTTCGA 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277060608030