Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1304 185 4e-45 seq119061 123 1e-26 seq454007 89.7 2e-16 seq110602 71.6 6e-11 >seq1304 Length=380674 Score = 185 bits (204), Expect = 4e-45 Identities = 102/102 (100%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 350973 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 351032 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||||||||||||||| Sbjct 351033 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 351074 >seq119061 Length=218 Score = 123 bits (136), Expect = 1e-26 Identities = 68/68 (100%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 35 GCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACAT 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACAT 60 Query 95 GTGGCGTA 102 |||||||| Sbjct 61 GTGGCGTA 68 >seq454007 Length=529 Score = 89.7 bits (98), Expect = 2e-16 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 165 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAATAGCCCAGCA 224 Query 61 CCGAATCCC 69 | ||||||| Sbjct 225 CTGAATCCC 233 >seq110602 Length=215 Score = 71.6 bits (78), Expect = 6e-11 Identities = 39/39 (100%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAG 39 ||||||||||||||||||||||||||||||||||||||| Sbjct 177 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAG 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229291537680