Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq27040 158 3e-36 >seq27040 Length=31898 Score = 158 bits (174), Expect = 3e-36 Identities = 247/349 (71%), Gaps = 17/349 (5%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | |||| |||||| || | | | || |||||| | ||||||||||| Sbjct 1485 ATCTTCACAGACATTATTATTTCATTGAATTTTTCTTTAAGACAGCGTTCAAATCGTTAC 1544 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT--A 126 ||||||| |||||| ||||||||||||| ||||| || |||||||||||||||||| | Sbjct 1545 GCCTTTCATGCGGGCCGGAACTTACCCGGCAAGGGGTTACGCTACCTTAGGACCGTTAAA 1604 Query 127 TAGTTACGGCCGCCGTT--TACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 | ||| |||| |||| |||| | ||||| | ||| || ||||| | Sbjct 1605 AAAATACAGCCGTCGTTTATACTAGAGCTTATAAAAATATCTTATAT-----TAACA-TT 1658 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 ||||| | | || || || ||||| |||||| |||||||| | | | || || Sbjct 1659 TTTTTTAACTTACTAGAACTGGACAGGCATCAGCTTTTATACATCATTGTTAAATTTTGC 1718 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGAC 304 | || |||||||||||| |||||||||| ||| |||| | | | | | || | Sbjct 1719 AAAAGCCTGTGTTTTTGATAAACAGTCGTTTGAACCTAGTATTT------TATACTATAT 1772 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAA 353 | | | |||| ||| ||||||||| |||||||||| | |||||||| Sbjct 1773 A-GTATTCCTTATCCAAAAGTTACGGAATCATTTTGCCTAATTCCTTAA 1820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056948007552