Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq464606 82.4 9e-14 seq55403 78.8 1e-12 >seq464606 Length=586 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| | || ||||||||| |||||||| ||| |||| | |||| Sbjct 279 AAACCAACAAAATAGAACCACA-GTCCTATTCCATTATTCCTAGCTGCAGTATCCAGGCG 221 Query 70 T---AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||| |||| | ||| Sbjct 220 GCTCAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGAAAA 180 >seq55403 Length=1807 Score = 78.8 bits (86), Expect = 1e-12 Identities = 79/101 (78%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| |||| ||||||||| |||||| | ||| |||| | |||| Sbjct 1176 AAACCAACAAAATAGAACCGCA-GTCCTATTCCATTATTTCTAGCTGCAGTATCCAGGCG 1234 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| | ||| Sbjct 1235 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGAAAA 1275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592241021418