Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq464606 93.3 4e-17 seq55403 87.8 2e-15 >seq464606 Length=586 Score = 93.3 bits (102), Expect = 4e-17 Identities = 128/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT---TTGCTCGAATACATTACCAT 69 ||| ||||||||||||||||| ||||||||||||||| || | |||| | | Sbjct 180 TTTTCTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTGAGCCGCCTGGATACTGCAGCTA 239 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| || ||||||||||||| ||||| | ||| | | |||| Sbjct 240 GGAATAATGGAATAGGAC-TGTGGTTCTATTTTGTTGGTTT-TTGGAACTGAGGCCATGA 297 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | ||||| | ||||| || | ||||||||||| |||| Sbjct 298 TGAAGAGGGACGGCTGGGGGCATTCGTATTGTGCTGCTAGAGGTGAAATTCCTGGA 353 >seq55403 Length=1807 Score = 87.8 bits (96), Expect = 2e-15 Identities = 127/176 (72%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||| ||||||||||||||||| |||||||||||||| || | |||| | | Sbjct 1275 TTTTCTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACTGCAGCTA 1216 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 | |||||| ||||||||| |||||||||||||||| ||||| | ||| | | |||| Sbjct 1215 GAAATAATGGAATAGGAC-TGCGGTTCTATTTTGTTGGTTT-TTGGAACTGAGGCCATGA 1158 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | ||||| | ||||| || | ||||||||||| |||| Sbjct 1157 TGAAGAGGGACGGCTGGGGGCATTCGTATTGTGGTGCTAGAGGTGAAATTCCTGGA 1102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509454642080