Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq427667 491 1e-136 seq25349 446 5e-123 seq187 428 1e-117 seq236557 425 2e-116 seq198 423 6e-116 seq8727 322 2e-85 seq164 264 4e-68 seq3408 251 2e-64 seq4820 237 5e-60 seq7953 159 1e-36 seq123644 156 1e-35 seq123416 156 1e-35 seq35478 156 1e-35 seq121268 149 2e-33 seq6548 138 4e-30 seq3919 138 4e-30 seq9010 134 4e-29 seq10084 114 4e-23 seq14304 113 1e-22 seq3407 102 3e-19 seq2608 98.7 3e-18 seq4354 96.9 1e-17 seq365288 95.1 4e-17 seq8954 95.1 4e-17 seq118712 93.3 1e-16 seq11820 91.5 5e-16 seq11342 89.7 2e-15 seq125694 87.8 6e-15 seq122773 80.6 9e-13 >seq427667 Length=440 Score = 491 bits (544), Expect = 1e-136 Identities = 323/355 (91%), Gaps = 9/355 (3%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-----AACGG-CT 238 || ||||||| |||| || | |||||||| ||||| ||| ||| |||| || Sbjct 77 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCA---GCGACGACCGCGAACGATCT 133 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||||||| ||| | |||| | | |||||||||||||||||||| Sbjct 134 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 193 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 194 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 253 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 254 AGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 313 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 314 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 373 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 374 GAATTTCATCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 428 >seq25349 Length=3084 Score = 446 bits (494), Expect = 5e-123 Identities = 270/285 (95%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 1878 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 1819 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1818 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1759 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || |||||||||||||| |||||||||||||| Sbjct 1758 ATAGTAGGTAGGGACAGTGGGAATCTCCTTCATCCATTCATGCGCATCACTAATTAGATG 1699 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1698 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 1639 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1638 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 1594 >seq187 Length=229634 Score = 428 bits (474), Expect = 1e-117 Identities = 273/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||| Sbjct 161264 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCATACTAGAGTCAAGCTCAA 161323 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct 161324 AAGGATCTTCTTTCCCCACTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 161383 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct 161384 ATAGTAGATAGGGACAGTGGGAATCTCATTCATCCATTCATGTGCGTCACTAATTAGATG 161443 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct 161444 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCCGTTTACCTGTGCTTCA 161503 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 161504 TTGAACTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 161560 >seq236557 Length=267 Score = 425 bits (470), Expect = 2e-116 Identities = 247/255 (97%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 203 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| Sbjct 202 TGGCTGTGGTTTCGCTGGATAGTAGGCAGGGACAGTGGGAATCTCGTTCATCCATTCATG 143 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 142 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATATTTACTCCCG 83 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 82 CCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 23 Query 519 CACATTGCGTCAACA 533 ||||| ||||||||| Sbjct 22 CACATCGCGTCAACA 8 >seq198 Length=88056 Score = 423 bits (468), Expect = 6e-116 Identities = 272/297 (92%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 83397 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 83338 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | | Sbjct 83337 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCTCGTTCCCTTGGCTGTGGTTTCGTTGG 83278 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct 83277 ATAGTAGGTAGGGACAGTGGCAATCTCGTTCATCCATTCATTCGCGTCACTAATTAGATG 83218 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | ||||||||| || ||||||||||||||| ||||||| ||||| ||||||||| ||| Sbjct 83217 AGGAGGCATTTAGCAACCTTAAGAGAGTCACAGTTACTTCCGCCATTTACCCGCACTTCA 83158 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 83157 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 83101 Score = 96.9 bits (106), Expect = 1e-17 Identities = 96/124 (77%), Gaps = 9/124 (7%) Strand=Plus/Minus Query 11 TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTT 70 ||||| || |||| ||||||| |||| |||| | |||||||||||||| ||||| |||| Sbjct 83690 TGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGTGTTATCGTTT 83631 Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCC 130 |||| ||| | ||| |||||||||||||||| || |||| |||||| ||| Sbjct 83630 GACAGGTGTACTGCC----CCAAACTCCCCACCTGGCACTGTC-----CCCGGAGCGGGT 83580 Query 131 CGCG 134 |||| Sbjct 83579 CGCG 83576 >seq8727 Length=492672 Score = 322 bits (356), Expect = 2e-85 Identities = 251/297 (85%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| ||||||||||||| || ||||| | | |||||||||||||||||| Sbjct 18531 CTCCCACTTACTCTACACCTCTCATATCTCTTCACTGTGCCAGACTAGAGTCAAGCTCAA 18590 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 || ||||||||||||| ||||||||| ||||| |||||||||||||||||||| || | Sbjct 18591 CAAGGTCTTCTTTCCCAGCTGATTCCTGGAAGCCTGTTCCCTTGGCTGTGGTTTC-CTGG 18649 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||| ||||||||| ||| |||||||||| || ||| |||||| ||| Sbjct 18650 ATAGTAGGTAGGGACAATGGGAATCTGGTTCATCCATTCATATGCATCAGTAATTACATG 18709 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | ||||| |||||||||||||||| |||||| |||||||| || ||||| || ||| Sbjct 18710 ATGAGGCTTTTGGCTACCTTAAGAAAGTCATCTTTACTCCCACCACTTACCTGCCCTTCA 18769 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||| || | |||||||||||||||| ||||||||||||| ||||||| Sbjct 18770 TTGAATTTCTTTAC-TAGACATTCAGAGCACTGAGCAGAAATCACATCAGGTCAACA 18825 Score = 149 bits (164), Expect = 2e-33 Identities = 112/132 (85%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 |||| |||||| |||| ||||| |||||||||||||||| |||||| |||||||| || Sbjct 18879 GTCAGTAATTACATGATGAGGCTTTTGGCTACCTTAAGAAAGTCATCTTTACTCCCACCA 18938 Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 ||||| || ||| ||||||||||| ||| ||||||||||||||||| ||||||||||| Sbjct 18939 CTTACCTGCCCTTCATTGAATTTCTTTACTATGACATTCAGAGCACTGAGCAGAAATCAC 18998 Query 522 ATTGCGTCAACA 533 || ||||||| Sbjct 18999 ATCAGGTCAACA 19010 >seq164 Length=654742 Score = 264 bits (292), Expect = 4e-68 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||| Sbjct 359851 CTCCCACTTATTCTACACCTCTCGTGTCTCTTCACCTTGCCACACTAGAGTCAAGCTCAA 359792 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||| ||||||| |||||||| ||||||||||||||||||| | | | Sbjct 359791 TAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTTGATGG 359732 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||| ||||||||| ||||| || ||||||||||| | ||||||||||||||| Sbjct 359731 ATAGTAGGTAGAGACAGTGGGTATCTCTTTCATCCATTCATGTGAGTCACTAATTAGATG 359672 Query 417 ACGAGGCA-TTTGGCTACCTTAAGAGAGTCATAGTTAC 453 || ||||| |||||||| |||||||||||| ||||||| Sbjct 359671 ACAAGGCATTTTGGCTATCTTAAGAGAGTCGTAGTTAC 359634 >seq3408 Length=317183 Score = 251 bits (278), Expect = 2e-64 Identities = 178/204 (87%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||| ||||| ||| ||||| | | | |||||||||||||||||| Sbjct 268928 CTCCCACTTATTCTACATGTCTCAGGTCTCTTCACCATGCCAGACTAGAGTCAAGCTCAA 268987 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||| ||||||| |||| ||| |||| |||||||||||||| ||| | Sbjct 268988 CAGGGTCTTCTTTCCCCACTGATTCTGCCACGCCTGTTCACTTGGCTGTGGTTTTGCTGG 269047 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| | |||||| ||||| |||| || ||||||||||| ||||||||| |||||| Sbjct 269048 ATAGTAGGTGGGGACAATGGGAGTCTCCTTCATCCATTCATGGACGTCACTAACTAGATG 269107 Query 417 ACGAGGCATTTGGCTACCTTAAGA 440 | |||||||||||||||||||||| Sbjct 269108 ATGAGGCATTTGGCTACCTTAAGA 269131 >seq4820 Length=640066 Score = 237 bits (262), Expect = 5e-60 Identities = 189/228 (83%), Gaps = 7/228 (3%) Strand=Plus/Plus Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||| ||||||||||||||| | ||||||||||||| |||||| || |||| | Sbjct 34930 CTTTCCCCCCTGATTCCGCCAAGCTTGCTCCCTTGGCTGTGACTTCGCTGCATGGTAGGT 34989 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||| | ||| | || |||||||||||| | ||||||||||||||| |||||| Sbjct 34990 AGGGACAGTGAGGATCCCATTCATCCATTCATGCACATCACTAATTAGATGATAAGGCAT 35049 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 ||||| ||||||||||||| ||||||||||| || |||| | |||||| ||||||||| Sbjct 35050 TTGGCCTCCTTAAGAGAGTCTTAGTTACTCCCACCATTTATCTGCGCTTCATTGAATTTC 35109 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||| | ||||||||||| | |||||| Sbjct 35110 TTCACTTTGACATTCAGA-------GAAGAAATCACATCACATCAACA 35150 >seq7953 Length=865986 Score = 159 bits (176), Expect = 1e-36 Identities = 122/144 (85%), Gaps = 8/144 (6%) Strand=Plus/Minus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 || ||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct 257678 GACAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCTTGCGCGTCATTAATTAGAT 257619 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 | || || |||||||||||||||||||||||||||| || ||||| | ||| Sbjct 257618 -----GCCAAATGCCTACCTTAAGAGAGTCATAGTTACTCCCACCATTTAC---CACTTC 257567 Query 476 GTTGAATTTCTTCACTTTGACATT 499 ||||||||||||||||||||||| Sbjct 257566 ATTGAATTTCTTCACTTTGACATT 257543 >seq123644 Length=220 Score = 156 bits (172), Expect = 1e-35 Identities = 89/91 (98%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 91 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTT 32 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||||||||||||||||||||||||||| Sbjct 31 TGACATTCAGAGCACTGGGCAGAAATCACAT 1 >seq123416 Length=220 Score = 156 bits (172), Expect = 1e-35 Identities = 89/91 (98%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 91 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTG 32 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTT 386 |||||||| |||||||||||||||||||||| Sbjct 31 GATAGTAGGTAGGGACAGTGGGAATCTCGTT 1 >seq35478 Length=5906 Score = 156 bits (172), Expect = 1e-35 Identities = 98/106 (92%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 |||||||||||||||||||||| ||| ||||| | | |||||||||||||||||||| Sbjct 5906 CCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACA 5847 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5846 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 5801 >seq121268 Length=219 Score = 149 bits (164), Expect = 2e-33 Identities = 84/85 (99%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 213 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 154 Query 339 TGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||| |||||||| Sbjct 153 TGGCTGTGGTTTCGCTGGATAGTAG 129 >seq6548 Length=147126 Score = 138 bits (152), Expect = 4e-30 Identities = 95/106 (90%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 ||| ||||||||| ||||||||||||||||| | | |||||||||||| | ||||||||| Sbjct 69439 GCTGGATAGTAGAAAGGGACAGTGGGAATCTTGCTCATCCATTCATGCACATCACTAATT 69498 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG-TTACTCC 456 || ||| ||||||||||||||||||||||||||||||| ||| ||| Sbjct 69499 AGCTGATGAGGCATTTGGCTACCTTAAGAGAGTCATAGATTAATCC 69544 >seq3919 Length=814773 Score = 138 bits (152), Expect = 4e-30 Identities = 103/121 (85%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465 ||||||||||||| ||||||||||||||||||||||| || |||||||| | | |||| Sbjct 610327 CTAATTAGATGACAAGGCATTTGGCTACCTTAAGAGATTCTTAGTTACTTTCATCATTTA 610268 Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 || | ||| ||| ||||||||||||||||||||||| |||| ||||||||||| | || Sbjct 610267 CCAGAACTTCATTGTATTTCTTCACTTTGACATTCAGAACACTAGGCAGAAATCATACTG 610208 Query 526 C 526 | Sbjct 610207 C 610207 >seq9010 Length=287603 Score = 134 bits (148), Expect = 4e-29 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| |||||||||| || || ||||| | | | |||||| ||| ||||| Sbjct 198258 CTCCCACTTACTCTACACCTCGCATTTCTCTTCACCATGCCAGACTAGGATCAGTCTCAA 198199 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||| |||| || |||||| ||||||||| ||||| ||||||| |||| ||| Sbjct 198198 CAGGGTTTTCTCTCTATGCTGATAAGGCCAAGCCCATTCCCATGGCTGTAGTTTTGCTGC 198139 Query 357 ATAGTAGATAGGGACAGTGGGAATCTC 383 ||||||| ||||||||||||||||||| Sbjct 198138 ATAGTAGGTAGGGACAGTGGGAATCTC 198112 >seq10084 Length=805014 Score = 114 bits (126), Expect = 4e-23 Identities = 102/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 557826 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 557767 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 557766 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 557712 Query 127 GGCCCGCG 134 || |||| Sbjct 557711 GGGTCGCG 557704 >seq14304 Length=238437 Score = 113 bits (124), Expect = 1e-22 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||||| |||||||||||| | || | ||||||||||||||||||| Sbjct 193391 CTTCTGCTCCACAGGAGGTTTCTGTTCTCCCTAAGCTCACCTTAGGACACCTGCGTTACC 193450 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| |||||||| ||||||||||||||| || |||| Sbjct 193451 ATTTGACAGGTGTACCGCCCCAATCAAACTCCCCACCTGGCACTGTC 193497 >seq3407 Length=781929 Score = 102 bits (112), Expect = 3e-19 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 ||||| | ||||||| |||||||| || | |||| |||| | |||||||| ||| Sbjct 374152 AGTCAGGTTCAACAGAGTCTTCTTCATCCACAGATTTTTCCAAACTGATTCCCTTGACTG 374093 Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 | ||||| ||| | ||| | || | | || | || || ||||||||||| ||| Sbjct 374092 TAGTTTCATCAGAAAATAGGTGAAGAGAATAGGCGTATCATTCTTCCATTCATGCATGTC 374033 Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAG 443 |||||||||||| ||| |||||||||||||||||||| Sbjct 374032 CCTAATTAGATGATAAGGAATTTGGCTACCTTAAGAGAG 373994 >seq2608 Length=652636 Score = 98.7 bits (108), Expect = 3e-18 Identities = 114/152 (75%), Gaps = 10/152 (7%) Strand=Plus/Plus Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||| || ||||||| ||||| | || |||||| ||| |||| | |||| | | Sbjct 409900 TCTTTGCCTGCTGATTGTGCCAAACTAATTGTCTTGGCAGTG-TTTCAATGGATACTGGG 409958 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||||||| | | ||||||| || ||||| |||||||| || ||| Sbjct 409959 TAGGGACAGTGGGAGT--------TGCATTCATAGGCATCACTGTTTAGATGATGAAGCA 410010 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||| ||||| ||| ||||||||||||| Sbjct 410011 TTTGGCTATCTTAA-AGAATCATAGTTACTCC 410041 >seq4354 Length=288749 Score = 96.9 bits (106), Expect = 1e-17 Identities = 115/152 (76%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 |||| |||||| | | || |||||| | ||| || ||||||| |||| || || |||| Sbjct 17749 AGTGAGAATCTTGGTCATGAATTCATACATGTCTCTGATTAGATAACGAAGCGTT-GGCT 17807 Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||| |||||| |||||||||||| ||| |||| ||| ||||||||||||||| Sbjct 17808 GCCTCAAGAGAATCATAGTTACTCT-GCCATTTATTTAA-CTTCATTGAATTTCTTCACT 17865 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACAT 523 |||||| | | |||||||||||| || || Sbjct 17866 CTGACATGGAATGTACTGGGCAGAAACCATAT 17897 >seq365288 Length=342 Score = 95.1 bits (104), Expect = 4e-17 Identities = 86/107 (80%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | |||||||||||||||||| Sbjct 305 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTT-GC 247 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| || |||||| ||||||||||||||| || |||| Sbjct 246 CTTTGACAGGTGTACCACCCCAGTCAAACTCCCCACCTGGCACTGTC 200 >seq8954 Length=179470 Score = 95.1 bits (104), Expect = 4e-17 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | |||| ||||||||| |||| Sbjct 100193 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTCGGACACCTGTGTTAGA 100134 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| || | |||| ||||||||||||||| || |||| Sbjct 100133 GTTTGACAGGTGTACCACTCCAGTCAAACTCCCCACCTGGCACTGTC 100087 >seq118712 Length=218 Score = 93.3 bits (102), Expect = 1e-16 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 33 CTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCA 92 |||| |||| | ||||||||||||||||||| |||| |||| ||| ||||||||| || Sbjct 3 CTCCCTGAGCTCGCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGCCCCAGTCA 62 Query 93 AACTCCCCACCTGACAATGTC 113 ||||||||||||| || |||| Sbjct 63 AACTCCCCACCTGGCACTGTC 83 >seq11820 Length=148268 Score = 91.5 bits (100), Expect = 5e-16 Identities = 85/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | ||||||||||||||| || Sbjct 59044 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCATT-GC 59102 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| || |||||| ||||||||||||||| || |||| Sbjct 59103 CTTTGACAGGTGTACCACCCCAGTCAAACTCCCCACCTGGCACTGTC 59149 >seq11342 Length=188681 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| |||||| |||| | || ||||||||||||||| ||| Sbjct 126855 CTTCTGCTCCACGGGAGGTTTCTGCCCTCCCTTAGCTTGCCTTAGGACACCTGCATTACT 126796 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| |||||| | |||||| || |||| Sbjct 126795 GTTTGACAGGTGTACCGCCCCAGTCAAACTGCACACCTGGCACTGTC 126749 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| |||||| |||| | || ||||||||||||||| ||| Sbjct 128385 CTTCTGCTCCACGGGAGGTTTCTGCCCTCCCTTAGCTTGCCTTAGGACACCTGCATTACT 128326 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| |||||| | |||||| || |||| Sbjct 128325 GTTTGACAGGTGTACCGCCCCAGTCAAACTGCACACCTGGCACTGTC 128279 >seq125694 Length=220 Score = 87.8 bits (96), Expect = 6e-15 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 7 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 66 Query 67 GTTTAACAGATGTGCCGCCCCAG 89 |||| |||| ||| ||||||||| Sbjct 67 GTTTGACAGGTGTACCGCCCCAG 89 >seq122773 Length=219 Score = 80.6 bits (88), Expect = 9e-13 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 207 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 148 Query 67 GTTTAACAGATGTGCCGCC 85 |||| |||| ||| ||||| Sbjct 147 GTTTGACAGGTGTACCGCC 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1626808529696