Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq407 300 3e-79 seq933 257 3e-66 seq245 205 2e-50 seq794 127 3e-27 seq697 122 1e-25 seq288 118 2e-24 seq51 93.3 7e-17 seq97 73.4 7e-11 >seq407 Length=1696304 Score = 300 bits (332), Expect = 3e-79 Identities = 225/263 (86%), Gaps = 1/263 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1520446 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 1520505 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| |||||||||||| ||| Sbjct 1520506 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAAACGA 1520565 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| ||||||||||||| |||| |||||||| ||||||| ||| |||| ||||||||| Sbjct 1520566 CATCTCAGGATCAAAAAGCGACGT-GCTATGAATGCTTGGCCGCCTCAAGACAGTTATCC 1520624 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | || | |||||||| ||| Sbjct 1520625 CTGTGGTAACTTTTCTGTCACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCGTGAGG 1520684 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||| || ||||||| Sbjct 1520685 CCCCGCTTTCACAGTCTGTATTC 1520707 >seq933 Length=673935 Score = 257 bits (284), Expect = 3e-66 Identities = 216/264 (82%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||| ||| ||| ||||||||| || |||| |||||||| Sbjct 183921 TCATCAGTAGGGTAAAACTAACATGTATCACCACGGTCTAATCCTGACTCATGTTCCCTA 183980 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||| ||||| ||| |||||||||||| ||||||| |||| || | Sbjct 183981 TTAGTGGGTGAACAGTCCAATGCTAGGTGAATTCTGCTTCACAATGATAGTAAGAACCAA 184040 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 | ||||||||||||||||| | |||||||||||||||||||||||| ||||||||| Sbjct 184041 TACAGAAGGATCAAAAAGCAAACTTACTATGAACGCTTGGCTGCCACAAGTCAGTTATCC 184100 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| ||||||| || | ||| | | || | ||| ||| ||| Sbjct 184101 CTGTGGTAACTTTTCTGACACCTCTTGCTTAAAACTGAAAAGGTCAGAAGAATC-TGAGG 184159 Query 271 CCACACTTTCATGGTTTGTATTCA 294 || |||||||| ||||||||||| Sbjct 184160 CCCCACTTTCACTGTTTGTATTCA 184183 >seq245 Length=2450502 Score = 205 bits (226), Expect = 2e-50 Identities = 160/191 (84%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 |||||||||||||| || ||||| | ||||||||||| ||||||| |||||||||||||| Sbjct 516806 ACTAACCTGTCTCACGATGGTCTTATCCCAGCTCACGCTCCCTATCAGTGGGTGAACAAT 516865 Query 107 CCAACGCTT----ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATC 162 || | | || | |||||||||||| |||||||||||||| || || ||||||| Sbjct 516866 CCGATGGTTGGTGAGTGAATTCTGCTTCACAGTGATAGGAAGAGCCAACCTCAAAGGATC 516925 Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222 |||||| | || |||||||||| ||||| |||| ||||||||||||||||||| ||||| Sbjct 516926 AAAAAGTGATGTTGCTATGAACGGTTGGCCGCCATAAGCCAGTTATCCCTGTGGCAACTT 516985 Query 223 TTCTGGCACCT 233 ||||| ||||| Sbjct 516986 TTCTGACACCT 516996 >seq794 Length=741057 Score = 127 bits (140), Expect = 3e-27 Identities = 152/204 (75%), Gaps = 7/204 (3%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| |||||||||||| ||| || ||||| | |||| |||||||||| || || Sbjct 228186 TCATCAATAGGGTAAAACTGTCCTATCACATGATTGCCTAATCCCAGCTCACATT-TTTA 228244 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| ||| ||| || ||||| | | ||| |||| Sbjct 228245 TTAGTGGGTGAACAATCCAACACTTGATGAAGTCCGCTTC-----AAAATGAAAAGCCAG 228299 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||||| ||| | | || ||||| | | |||||| ||||| ||| | |||| Sbjct 228300 TATCTAAGGAATAAACAATAGAGTTGCTAT-AGCACTTGGCCACCACAGTCCACTGATCC 228358 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 || | |||||||||||| |||||| Sbjct 228359 CTCTAGTAACTTTTCTGACACCTC 228382 >seq697 Length=935226 Score = 122 bits (134), Expect = 1e-25 Identities = 106/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 |||||||| |||| ||||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct 96739 CAAAAAGCGACGTTGCTATGAACGCCTGGCCGCCACGAGCCAGTTATCCCTGTGGTAACT 96680 Query 222 TTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 |||||| |||||| || | ||| | || | ||||||| ||||| | |||||| Sbjct 96679 TTTCTGACACCTCCTGCTTAAAACCAAAAAGGTCAGAAGGATCATGAGGCCCCGCTTTCA 96620 Query 282 TGGTTTGTATTC 293 ||| ||||||| Sbjct 96619 CGGTCTGTATTC 96608 >seq288 Length=2081148 Score = 118 bits (130), Expect = 2e-24 Identities = 118/154 (77%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGAT--------AG 140 ||||||| |||||||||||||||| || |||||||||||| |||| | Sbjct 329791 TATTAGTTGGTGAACAATCCAACGTTTCATGAATTCTGCTTCACAATGACTCTTCACAAT 329850 Query 141 GAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAG 200 |||||| | ||||| ||||||||||||| || ||||||||| ||||||| || ||| Sbjct 329851 GAAGAGTCAACATCAAAGGATCAAAAAGTGACATCGCTATGAGGAATTGGCTGTCATAAG 329910 Query 201 CCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||| ||||||||| | | ||||||| |||||| Sbjct 329911 CCAGCTATCCCTGTAGCAGTTTTTCTGACACCTC 329944 >seq51 Length=4785106 Score = 93.3 bits (102), Expect = 7e-17 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 |||||||| ||| | |||||||| | ||||||||||||||||||||||||||||||||| Sbjct 2144654 ATCAAAAAATAACATTGCTATGAATG-TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 2144596 Query 220 CTTTTCTG 227 |||||||| Sbjct 2144595 CTTTTCTG 2144588 >seq97 Length=4201806 Score = 73.4 bits (80), Expect = 7e-11 Identities = 70/90 (78%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||| | || | ||| | ||| ||||||||| ||||||||||| || Sbjct 2546433 GAAGGATCAAAAATGGATGTTTCAGTGATTGGTTGTCTGCCACAAACCAGTTATCCCAGT 2546492 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||||||||| | ||| |||| ||| Sbjct 2546493 GGTAACTTTTCTGATAGCTCCTGCCTAAAA 2546522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854335313376