Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq159 291 3e-76
seq61 288 3e-75
seq288 273 7e-71
seq3 269 9e-70
seq407 228 3e-57
seq40 203 1e-49
seq305 176 1e-41
seq313 123 8e-26
seq28 78.8 3e-12
>seq159
Length=3019745
Score = 291 bits (322), Expect = 3e-76
Identities = 182/196 (93%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 338 TTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397
|||| ||||||||| || | |||||| ||||||||||||||||||| || ||||||||||
Sbjct 2405407 TTGGATGTGGTTTCACTGGCTAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCAT 2405348
Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2405347 GCGAGTCACTAATTAGATGAGGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 2405288
Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517
| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2405287 GTCGTTTACCCGTGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 2405228
Query 518 TCACATTGCGTCAACA 533
|||||| |||||||||
Sbjct 2405227 TCACATCGCGTCAACA 2405212
>seq61
Length=4764024
Score = 288 bits (318), Expect = 3e-75
Identities = 244/300 (81%), Gaps = 9/300 (3%)
Strand=Plus/Plus
Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300
||||||||||||||||||| ||| ||||| | | | || |||||| |||||| ||
Sbjct 1993163 CACTTATTCTACACCTCTCCTGTCTCTTCACTGTGCCAGGCTGGAGTCAGACTCAACGGG 1993222
Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360
|||||||||||| | |||||| ||||| | ||| |||||||||||||||||| |||||
Sbjct 1993223 GTCTTCTTTCCCTGTTGATTCTGCCAAAGTCATTCACTTGGCTGTGGTTTCGCTGGATAG 1993282
Query 361 TAGATA-------GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
| | || ||| |||||||||||| ||| | ||||||||||||||||||||||||
Sbjct 1993283 TGGGTAGTGGGTCGGGGCAGTGGGAATCTGGTTCACCCATTCATGCGCGTCACTAATTAG 1993342
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473
||| || |||||||||| |||| | |||||||| ||||||| | ||||||||| ||
Sbjct 1993343 ATGGTGAAGCATTTGGCTGCCTT--TAAAGTCATAGGTACTCCCACTATTTACCCGCCCT 1993400
Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| ||||||||| ||||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct 1993401 TCTTTGAATTTCCTCACTTTGACATTCAGAGCACTGGGAAGAAATCACATCACTTCAACA 1993460
>seq288
Length=2081148
Score = 273 bits (302), Expect = 7e-71
Identities = 243/302 (80%), Gaps = 8/302 (3%)
Strand=Plus/Plus
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG----AGTCAAGCT 293
|||| |||||||||||||| ||| ||| ||||| | | |||||| |||||||||
Sbjct 330325 TCCCGCTTATTCTACACCTTTCATGTCGCTTCACTT-GCCAGACTAGGTAGAGTCAAGCT 330383
Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353
|||||||||| |||||| ||||||||| |||| |||||||||| ||||||||||| |
Sbjct 330384 CAACAGGGTCCATTTTCCCAGCTGATTCCTCCAACCCCGTTCCCTCTGCTGTGGTTTCAC 330443
Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413
| || || | |||||||| ||||||| ||||| || |||||||| | ||||| ||||
Sbjct 330444 TGGAGAGACGGTAGGGACACTGGGAATATCGTTTATGCATTCATGGAGGGCACTAGTTAG 330503
Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCC---CGCCGTTTACCCGC 470
|||| ||||||||| ||||| ||||| ||||| |||||||||| |||| || ||||
Sbjct 330504 ATGAGGAGGCATTTAGCTACTTTAAGTGAGTCCTAGTTACTCCTGTCGCCATTCACCCAG 330563
Query 471 GCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530
|||| |||||||||||||| ||| |||||| |||| ||||||||||||||| | |||
Sbjct 330564 GCTTCACTGAATTTCTTCACTCTGATATTCAGGGCACGGGGCAGAAATCACATGACATCA 330623
Query 531 AC 532
||
Sbjct 330624 AC 330625
>seq3
Length=9617682
Score = 269 bits (298), Expect = 9e-70
Identities = 239/297 (80%), Gaps = 4/297 (1%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||| |||||| | |||| |||| | || ||||||||||||||
Sbjct 4697091 CTCCCACTTAG---ACACCTTTTGAGTCTCTTCATTGTTCCAGAATAGAGTCAAGCTCAG 4697147
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
| ||||| ||| | | ||||||| | || | |||||| |||||||||||| ||| |
Sbjct 4697148 CGAAGTCTTTTTTTCTCACTGATTCTGTCAGATCTGTTCCCCTGGCTGTGGTTTTGCTGG 4697207
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| || ||||||| ||||||| ||| ||||||||| | ||||||||| |||||
Sbjct 4697208 ATAGTAGGTAAGGACAGTAGGAATCTTGTTCATCCATTCACACATGTCACTAAT-AGATG 4697266
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||| |||| ||||||||| || | |||||| | ||||
Sbjct 4697267 ACGAGGCATTTGGCTACCTTAAGGGAGTTATAGTTACTTCCATCATTTACCTGTGCTTCA 4697326
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||| |||||||||||| || ||||||||||||| |||||||
Sbjct 4697327 TTGAATTTCTTCACTTTGATATTCAGAGCACTAGGTAGAAATCACATTGTGTCAACA 4697383
>seq407
Length=1696304
Score = 228 bits (252), Expect = 3e-57
Identities = 315/443 (71%), Gaps = 57/443 (13%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||||||| ||||||| |||| |||| |||||||||||||||||||
Sbjct 1520741 CTTCTGCTCCACAGGAGGTTTCTGTCCTCCCTGAGCTTGCCTTAGGACACCTGCGTTACC 1520800
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| ||
Sbjct 1520801 ATTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGTC 1520860
Query 127 G-GCCCG-CGA--------AGGACCTTAACGCCAGAAA--ATGGTCGGTGAAGACCAGTT 174
| ||||| | | ||| ||| | |||||| || | | | | | ||
Sbjct 1520861 GCGCCCGGCCAGTGTGGCCAGGCGCTTGGCTCCAGAAGCGATAGCCCCTCGGGGCTCGTG 1520920
Query 175 C---CGCTTCATTGATTAAGTaaaaaaa------------CGATAAGGGTAGTGGTATTT 219
| ||| ||| | | |||||||||| || |||| ||||||| ||||
Sbjct 1520921 CACCCGCCTCACCGGATCAGTAAAAAAAAAAAAAAAAAATCGGTAAGAGTAGTGGGATTT 1520980
Query 220 CACTTGCGCCG--AA-----------ACGG----------------CTCCCACTTATTCT 250
||| ||| || |||| ||||| ||||||||
Sbjct 1520981 CACCAAGGCCCGCAAGGCCGGCGGGGACGGGGGTGATGCCGGAGGCCTCCCGCTTATTCT 1521040
Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310
|||||||||| ||| ||||| | | ||||||||||||||||||||||||||||||||
Sbjct 1521041 ACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 1521100
Query 311 CCCGCTGATTCCGCCAAGCCCG-TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369
|||||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||||
Sbjct 1521101 CCCGCTGATTCCGCCAAGCCCGTTTCCCTTGGTTGTGGTTTCGCTGGATAGTAGGTAGGG 1521160
Query 370 ACAGTGGGAATCTCGTTAATCCA 392
|||||||||||||| || |||||
Sbjct 1521161 ACAGTGGGAATCTCATTCATCCA 1521183
>seq40
Length=5640420
Score = 203 bits (224), Expect = 1e-49
Identities = 222/289 (77%), Gaps = 6/289 (2%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCA 295
|||||||||| |||| ||||| ||| ||||| | | | || || ||||| | |||
Sbjct 4421387 CTCCCACTTAATCTATACCTCCTGTGTCTCTTCACCATGCCAGGTTTATAGTCAGGTTCA 4421328
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
|||| ||||||||| ||| |||| |||||||| ||||||||||||||||||| |
Sbjct 4421327 ACAGAGTCTTCTTTGCCCAAAGATTTTGCCAAGCCA-TTCCCTTGGCTGTGGTTTCATCA 4421269
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|||| ||| || ||| | ||| || || ||| |||||| | |||| |||||| ||
Sbjct 4421268 GATAATAGGTAAAAACAATAACAATATCATTCATCTATTCATACACGTCCCTAATTCTAT 4421209
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GCCGTTTACCCGCGCTT 474
| |||||||||||||||||||| |||||||||||||| ||| | ||||| ||||
Sbjct 4421208 GGTGAGGCATTTGGCTACCTTAACAGAGTCATAGTTACACCCATCAATTTACTTAAGCTT 4421149
Query 475 -GGT--TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|| | ||| |||||||||||||||||||| ||||||||| ||||||
Sbjct 4421148 CTGTAGTAAATATCTTCACTTTGACATTCAGATCACTGGGCAAAAATCA 4421100
>seq305
Length=2012256
Score = 176 bits (194), Expect = 1e-41
Identities = 120/134 (90%), Gaps = 7/134 (5%)
Strand=Plus/Minus
Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462
||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1392053 TCACTAATTTGATGACGAGGCATTTGGCTACCTTAAAAGAGTCATAGTTAC----GCCGT 1391998
Query 463 TTACCC---GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519
||| || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1391997 TTAACCCACGCGCTCCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 1391938
Query 520 ACATTGCGTCAACA 533
|||| |||||||||
Sbjct 1391937 ACATCGCGTCAACA 1391924
>seq313
Length=2252533
Score = 123 bits (136), Expect = 8e-26
Identities = 134/173 (77%), Gaps = 11/173 (6%)
Strand=Plus/Minus
Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC----CCTTGGCTG 344
||||||||| |||||| |||| |||||| | ||| ||| ||| |||||||||
Sbjct 527502 AAGCTCAACCAGGTCTT---TCCCTGCTGATACTGCCCAGCTAGTTAATTGCCTTGGCTG 527446
Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404
|| |||| | |||| ||| ||| ||| |||||||||| ||| || ||||||| || ||
Sbjct 527445 TG-TTTCA-TGGATACTAGGTAGAGACTGTGGGAATCTTGTTCATTCATTCATAGGCATC 527388
Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457
|||| |||||| ||||||| ||||| |||| || ||||||||||||||||
Sbjct 527387 ACTATTTAGATAGTGAGGCATATGGCTGCCTT--GACAGTCATAGTTACTCCC 527337
>seq28
Length=6938960
Score = 78.8 bits (86), Expect = 3e-12
Identities = 64/78 (82%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 317 GATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 376
|||||||||||||| ||| |||||||||| ||| || ||||| | |||||||||| |
Sbjct 2658736 GATTCCGCCAAGCCTGTTTCCTTGGCTGTATTTTTTCTGGATAGCATGTAGGGACAGTAG 2658795
Query 377 GAATCTCGTTAATCCATT 394
||||||| || |||| ||
Sbjct 2658796 GAATCTCATTTATCCTTT 2658813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635076199008
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